Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02026 ATGGAAAAAGGTGAAGGGCGAAGACACGTTCTTCTCTCAAGTGCTGAAAAAAAGGAAATAGCAGAAAGTTATATGGATAACAAATCACCGAGCAATAAGGCATCTGAGGAGCTGGCACGTGAGTTGCTTATTGCTATCTCTGATTCTTTACCAGATAAAACTCTGGATTCCGATTTTGTGCCCGAAAGCAAGGACGCAGACAGCTTTGCAAGACCAAACGGTGATTGGGATGACAAGTTTAGAAAATTCAATCTGGAGAATCTTACTCGGCTTCTTAGGAGAGTGAATGAATGGTACTATGTTTCTAGGCTTCAGGGAAAGTTGCAACACCCTCTCCCACCAGGTCATCTGGGTTGGCCTTTATTGGGGAACATGCCCACCTTCCTCAGAGCTTTTAAGTCTAACCCTGATTCCTTCATCTATGACCTTGTTTCCAGATATGGCAGGACGGGTATGTACAGAACGTACTTGTTTGGGAGCCCCAGCATCATAGTTTGCACCCCAGAGACGTGCCGTAAGGTTCTCACAGATGATGAAAATCTCAAGCTTGGATACCCTCCTTCCACCACGGCCCTCACCGGAAAGAGATCACTCCATGGCATCTCAAATGCTGAACACAAGCGCCTTCGCCGCCTAATCACCTCTCCCATAACCGGCCACGAGGCATTGTCCACGTACATAGGTCTCATAGAACATGCTTCTGTGAAACGGTTGGAAGAGTTGTCTAGCATGAACACGCCTTGTGAGTTCCTCACAGAGTTAAGGAAGTTCGCTTTTAAGGTCTTCACCACCATCTTCATGGGCTCTGATGTTGATCATGTAGACCTGGCCTTGTTCGAAAACTTGTACAAAGATTTGAATCGGGGAATGAAGTCACTGGCTATCAATCTCCCAGGCTTTCCATTCTACAAAGCACTCAAGGCACGAAAGAAGTTGATGAAGTTGCTGCAAGGCTTGGTGGACCAAAAGAGAAGGACCAATAATACAATTACAAAAACAAAGAGGAGGAAATTAGATATGATGGATTTATTGATGGAAGTCAAAGATGAAGACGGTAGGCAGCTGGAAGATGAAGACATTATAGACTTACTTCTGGTTTTCTTGTTAGCTGGTTACGAAAGCTCTGCTCATGGAATATTGTGGACCATCATCTACCTCACGGAACACCCACTTGTCTTCCAAAGGGCTAAGAAAGAACAAGAAGAGATCATGGAAACAAGACCTTTATCACAGAAAGGGCTCAACCTTAAGGAAATTAAGCAAATGGAATATCTTTCAAAGGTTATCGACGAGATGCTGCGCAGAACAAGTATCTCTTTTGCGAACTTTAGACAGGCAAAGGTTGATCTCAACATCAATGGTTATACTATACCAAAAGGATGGAAAGTTCTAGTTTGGAACCGAGGGGTTCACATGGATCCTGAAACTTATCGCAATCCAAAAGAATACGATCCTTCAAGATGGGAAAATCACACGGCAAGAGCAGGTTCTTTCCTTCCGTTTGGATTGGGAAGCAGGTTTTGTCCTGGGAGCGACCTGGCCAAACTTGAGATCACCATTTTCCTCCATCATTTTCTTCTTAACTACAGGATGGAGAGAATTAATCCAGATTGTCCAGCCACTTACCTACCGGTGCCAAGGCCTTCAGACAATTGCTCTGCAAGAATTATAAAAGCCACATAA 1683 0.4421 MEKGEGRRHVLLSSAEKKEIAESYMDNKSPSNKASEELARELLIAISDSLPDKTLDSDFVPESKDADSFARPNGDWDDKFRKFNLENLTRLLRRVNEWYYVSRLQGKLQHPLPPGHLGWPLLGNMPTFLRAFKSNPDSFIYDLVSRYGRTGMYRTYLFGSPSIIVCTPETCRKVLTDDENLKLGYPPSTTALTGKRSLHGISNAEHKRLRRLITSPITGHEALSTYIGLIEHASVKRLEELSSMNTPCEFLTELRKFAFKVFTTIFMGSDVDHVDLALFENLYKDLNRGMKSLAINLPGFPFYKALKARKKLMKLLQGLVDQKRRTNNTITKTKRRKLDMMDLLMEVKDEDGRQLEDEDIIDLLLVFLLAGYESSAHGILWTIIYLTEHPLVFQRAKKEQEEIMETRPLSQKGLNLKEIKQMEYLSKVIDEMLRRTSISFANFRQAKVDLNINGYTIPKGWKVLVWNRGVHMDPETYRNPKEYDPSRWENHTARAGSFLPFGLGSRFCPGSDLAKLEITIFLHHFLLNYRMERINPDCPATYLPVPRPSDNCSARIIKAT 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02026 560 Pfam Cytochrome P450 113 535 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g02026 560 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 501 510 IPR017972 GO:0005506|GO:0016705
Gma01g02026 560 PANTHER CYTOCHROME P450 88D6 91 537 - -
Gma01g02026 560 SUPERFAMILY Cytochrome P450 110 556 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g02026 560 PANTHER CYTOCHROME P450 26 91 537 - -
Gma01g02026 560 PRINTS E-class P450 group I signature 466 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g02026 560 PRINTS E-class P450 group I signature 359 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g02026 560 PRINTS E-class P450 group I signature 498 508 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g02026 560 PRINTS E-class P450 group I signature 379 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g02026 560 PRINTS E-class P450 group I signature 508 531 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g02026 560 PRINTS P450 superfamily signature 508 519 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g02026 560 PRINTS P450 superfamily signature 499 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g02026 560 PRINTS P450 superfamily signature 370 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g02026 560 PRINTS P450 superfamily signature 427 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g02026 560 Gene3D Cytochrome P450 103 559 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02026 Gma-Chr1 55676907 55687180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02026 88 559 Cytochrome P450 AT2G32440 54.968 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02026 K04123 - gmx:100775911 765.377