Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02024 ATGGGAAGCAATGGATTCTGCAACCTTTTTTCTTGCTTCAAAGCCTCCTCCAACCACACTCCTAACCACAACCATAACCAAAACCAGCTGGTGTTTGCGGAGACGGAGCCATTGGACGAAACCCTAGGCCACTCTTTCTGCTACGTTAGATCttccgctcgctttctctctccctcccattccgatcgcatcctctctccctccAACTCCCTCCGCTTCTCCCCTTCTCACCCCCCCGATTTACCCGAAACCGCATTCAAGGCCATTTCCGGCGCCTCCGTCAGCGCCAACAGCTCCGTCCCCAAAACCGTCCTCCAGACCGACGATGACGATGGCGATGACACCGCCGTCAATGGCTTCAAAGGAACGTCTTCGTTTAGCGCCCTCCCGCTCCAGCCTGTTCCAAGAGGTGGAGGAGCTGAAGATAGAGAGAGGCGGGCGTTCTTCCTCTCGGGGCCAATTGAGAGCGGCGCGCTCTCCGGACCCCTCGACGACGCCGTTTCGAGCTCCGAGGGAGTGCCTTTCTCTGCTCCGCTAGGTGGTTCAGTCTATGTGAAGAAGAAGCGGAAGAAGAGCATTGCGGGGTTGAGAAAAGCCTTCCAGAGGAGTCTCTCTGAGAAGAAGCGCCCCTGGGTGGTTCCGATGGAAAGGAAGGGGAAGACGGAGGCAAAAGACGAGAGCGAAACCGAGAGCAATGTGCAGTGGGCGCTGGGAAAAGCAGGGGAGGATCGTGTGCATGTGGTTGTATCGGAAGAACAGGGTTGGTTGTTCGTGGGGATTTACGACGGTTTCAATGGTCCTGACGCGCCCGAGTTTCTCATGGGTAATCTCTACCGTGCACTTCACAAAGAGCTCCAGGGTTTGTTTTGGGAGCTTGAGGAGTCAGAGCCGCAGGTGCAGGGAACTAATCCTGCACCTGCGGTTGAGGATAATGAGGCTGAATCCCACAATGACGGGGAGGTTGAAAAAGAGTCTAATTCTAATTCTCTCCAAGGATCGGTTAAGAGAGTGACGTTTCAAGCGGAGGGAACTGAGAGTAGGAGGAGGAGGTTGTGGGAGTTTTTGGCTGAGGATGATGATGATGCTGAGGACGGGCTTGATCTTTCAGGGTCTGATAGGTTTGGGTTTACGGTGGATGATGCTCTCAGTGTTAGCAAGGAGGGTTCGGGGGGTAGTAGGCGGTGGTTGATTTTGTCTAAGTTGAAGCATGGGTTGTCGAGGCACAGGGAGGGTCATGGGAGGAGGTTGTTCCCGTGGAGCTTGGGCGTGGGGGCGGAGGAGAAGAAGGTTGAGGAGGAAAATCCGGTGGCGGGGAAGGAGGAGGAGAAAAAGGGTCGTGGTGGGAGGAAGAGGAAGGTGGGGCCTGTGGATCATGAGTTGGTTTTGAGGGCGTTGTCTCGGGCGCTTGAGATGACCGAGCTTGCATATTTGGATATGACGGATAAGCTTATTGATACCAATCCGGAGCTTGCTTTGATGGGTTCGTGTCTGTTGGTTGTGTTGATGAGGGATGAGGATGTTTATGTGATGAATGTCGGGGATAGCCGGGCCATTGTGGCACATTATGAGTGTGAAGAGGTTCATGCTAGTAAGGAATCTGGAGGCGGTGCAGACGTTGAGTCAAGTGGGGAGTGCATAGTGGAGGAGAACTTAGCTCCGGATGAAGGTGCTGTTGTGTTGGGGAATGAGGGTCCTGCTCAAGAAAGGAGGTTGGTTGCATTGCAGCTCTCCACTGACCACAGCACCAGCATTGAAGAGGAAGTTGTTAGGATTAAGAATGAACATCCTGATGATAACCGATGTATTGTAAATGATAGAGTAAAAGGCCGTCTTAAGGTCACTAGAGCTTTTGGAGCTGGATTTTTGAAACAGCCGAAGTGGAATGATGTGGTACTAGAAATGTTTCGAAATGAATATATTGGCACTGCTCCATATATATCCTGCTGCCCTTCATTACGTCACCATAGATTATGCCCAAGAGATCAGTTCTTGATCCTCTCATCTGATGGGTTGTATCAATATCTTAGCAATCAGGAAGTGGTTTCTGAAGTTGAGAGTTTCGTGGAAAAGTTTCCGGATGGAGATCCTGCCCAGCATTTAATAGAGGAGCTGCTCCTTCGTGCAGCTAAAAAAGCTGGAATGGATTTCCATGAGTTGCTGGATATCCCTCAAGGAGATCGGAGGAAGTACCATGATGATGTTACCGTTATGGTGGTATCACTCGAAGGAAGAATCTGGAAATCATCAGGGAAGTATCCGTGA 2262 0.5013 MGSNGFCNLFSCFKASSNHTPNHNHNQNQLVFAETEPLDETLGHSFCYVRSSARFLSPSHSDRILSPSNSLRFSPSHPPDLPETAFKAISGASVSANSSVPKTVLQTDDDDGDDTAVNGFKGTSSFSALPLQPVPRGGGAEDRERRAFFLSGPIESGALSGPLDDAVSSSEGVPFSAPLGGSVYVKKKRKKSIAGLRKAFQRSLSEKKRPWVVPMERKGKTEAKDESETESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGNLYRALHKELQGLFWELEESEPQVQGTNPAPAVEDNEAESHNDGEVEKESNSNSLQGSVKRVTFQAEGTESRRRRLWEFLAEDDDDAEDGLDLSGSDRFGFTVDDALSVSKEGSGGSRRWLILSKLKHGLSRHREGHGRRLFPWSLGVGAEEKKVEEENPVAGKEEEKKGRGGRKRKVGPVDHELVLRALSRALEMTELAYLDMTDKLIDTNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYECEEVHASKESGGGADVESSGECIVEENLAPDEGAVVLGNEGPAQERRLVALQLSTDHSTSIEEEVVRIKNEHPDDNRCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSEVESFVEKFPDGDPAQHLIEELLLRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVVSLEGRIWKSSGKYP 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02024 753 PANTHER PROTEIN PHOSPHATASE 2C 24 751 IPR015655 GO:0004722|GO:0006470
Gma01g02024 753 Pfam Protein phosphatase 2C 562 709 IPR001932 -
Gma01g02024 753 CDD PP2Cc 457 741 IPR001932 -
Gma01g02024 753 MobiDBLite consensus disorder prediction 295 341 - -
Gma01g02024 753 MobiDBLite consensus disorder prediction 428 452 - -
Gma01g02024 753 Gene3D - 198 388 IPR036457 -
Gma01g02024 753 Gene3D - 400 748 IPR036457 -
Gma01g02024 753 SMART PP2C_4 226 739 IPR001932 -
Gma01g02024 753 MobiDBLite consensus disorder prediction 324 340 - -
Gma01g02024 753 SUPERFAMILY PP2C-like 239 742 IPR036457 -
Gma01g02024 753 PANTHER PROTEIN PHOSPHATASE 2C 29 24 751 - -
Gma01g02024 753 ProSiteProfiles PPM-type phosphatase domain profile. 226 741 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02024 Gma-Chr1 55656041 55661161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02024 1 752 PP2C-type Phosphatase Gene Family AT2G35350 56.366 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02024 - - gmx:100775371 1455.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02024 01 55656041 55661161 Gma11g00386 11 3144553 3149351 GST
Gma01g02024 01 55656041 55661161 Gma17g01404 17 13137534 13141636 PCT
Gma01g02024 01 55656041 55661161 Gma05g01145 05 32537217 32542622 PCT
Gma17g01404 17 13137534 13141636 Gma01g02024 01 55656041 55661161 PCT
Gma05g01145 05 32537217 32542622 Gma01g02024 01 55656041 55661161 PCT