Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g02017 ATGGCTGGTTTGGATTTAGGCACGGCTTCACGCTTCGTCCAAAGTCTCCACAGACCAGACTTCAACCAACAACAAGAATCCGAGGAAGACGCCAAACCCCAAGATGGGCCCCAGCAGGGCGACGTGGTGGGGCGCCGCCCGCGGGGGCGTCCTGCGGGCTCCAAGAACAAGCCCAAGCCGCCGGTCATCATTACGCGGGAGAGCGCCAACGCCCTCCGCGCCCACATCCTCGAAGTCGCCAGCGGCTGCGACGTCTTCGAAAGCGTCGCCAGCTACGCGCGCCGCCGCCAGCGCGGGATCTGTATCCTCAGCGGCAGCGGAACGGTCACGAATGTGAGCCTGCGGCAGCCGGCGTCGGCGGGCGCGGTGGCCACGCTTCACGGCAGGTTCGAGATACTCTCCCTGACGGGATCGTTCCTTCCTCCGCCGGCTCCTCCGGGGGCGACGAGTCTCAGCATATACCTCGCCGGAGGACAGGGGCAGGTGGTGGGTGGGAGTGTGGTAGGAGAGTTGACGGCGGCGGGACCGGTAATTGTGATCGCGGCGTCGTTCACGAACGTGGCTTATGAAAGGTTACCGTTGGAGGAAGAAGAAGAACAGGTTCAGATTTCTGGTGCTGCTGCCAATAACAATAATAATAGTAACCCCTATCATGATCCTTCTTCGGGACTTCCTTTCTTCAATTTGCCAATGAATGTTCAGTTGCCTGTGGATGCCTGGGCGGGAAACTCAACTACACGTTCACCATTTTGA 753 0.6016 MAGLDLGTASRFVQSLHRPDFNQQQESEEDAKPQDGPQQGDVVGRRPRGRPAGSKNKPKPPVIITRESANALRAHILEVASGCDVFESVASYARRRQRGICILSGSGTVTNVSLRQPASAGAVATLHGRFEILSLTGSFLPPPAPPGATSLSIYLAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEEEEQVQISGAAANNNNNSNPYHDPSSGLPFFNLPMNVQLPVDAWAGNSTTRSPF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g02017 250 Gene3D - 72 209 - -
Gma01g02017 250 MobiDBLite consensus disorder prediction 1 62 - -
Gma01g02017 250 ProSiteProfiles PPC domain profile profile. 69 209 IPR005175 -
Gma01g02017 250 SUPERFAMILY AF0104/ALDC/Ptd012-like 69 200 - -
Gma01g02017 250 PIRSF ESCAROLA 8 246 IPR014476 GO:0003680
Gma01g02017 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 23 22 250 - -
Gma01g02017 250 CDD DUF296 73 156 IPR005175 -
Gma01g02017 250 Pfam Plants and Prokaryotes Conserved (PCC) domain 73 186 IPR005175 -
Gma01g02017 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 22 250 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g02017 Gma-Chr1 55593451 55594203 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g02017 1 250 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 58.392 2.36e-95 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g02017 - - gmx:100818680 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g02017 01 55593451 55594203 Gma11g00393 11 3199363 3200610 GST
Gma01g02017 01 55593451 55594203 Gma17g01422 17 13365245 13366576 PCT
Gma01g02017 01 55593451 55594203 Gma05g01126 05 32193681 32197663 PCT
Gma17g01422 17 13365245 13366576 Gma01g02017 01 55593451 55594203 PCT
Gma05g01126 05 32193681 32197663 Gma01g02017 01 55593451 55594203 PCT