Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01963 ATGGGGAGTTCTGGAAGTGGCACCTTATTTTCCTTGTCTAGCCTCTTGTGTGACGAAGAAGGAGAAGCTAGATTGTTTAAAGACCAAGATGAGAACCCTGGCATTTTTTACTCTCTTGATAACTCATGTTTCGTTTTGGAGGATGAAGAGGAATACATTGAGTATTTGTTCAAACAAGAAACGGGATTTGGATCCCAGAATCACCACTTTTTTACCTCTGATGATCATTCAAACAGACACTGGTTACGAAGTGCCCGTGTTGATGCCATTGACTGGATTTTAAATACACAAGCAAAATTTGGGTTCAAAGTTGAAACTGCCTATTTATCAGTGACTTACTTTGATCGGTTTCTTTCAAAGCGATCCATCGATGAATCGAAACCTTGGGCTATTAAGTTATTATCTGTGGCATCTTTATCTCTGGCAGCAAAGATGGAAGAGCAAAATGTGCCGGTTTTATCCGAGTATCCAATGGATGATTATCGGTTTGAGAATAAAGTAATTAAGAACATGGAACTGATGATTTTGAGTACCTTGGATTGGAAAATGGGATCAGCAACTCCTTTTTCCTATTTGCATTACTTTGTCGGCAAGTTCTGCCCTGGATCCAAACCACAAATAATAATCACAAAAGCCACTGAACACATTGTGGCCATGGTCAAAGATGTTAATTTGATGGATCAAAGACCATCTTTAATTGCCTCGGCAGCCATATTGGCAGCTTTTGATGCTACATTAACAAGAAAAGCAATGGATCTTCGATTAAGTTTAATCTCATCGTGGGGAAATGTAGAAAGTGGACATGTGTTTTTCTGTTACAATCTAATACAGGAAAAGATGAAAAGCAAAGTTAAGACACCTTGCTCGAATTTAATGTCTGCTCAGTCGAGCTCCACGTGTGTTCTTGAGAACCAATCTGACACTTCTTCGGGAGCTAAGAGAAAACTTAGTTTTGAGGACAGTGAAAATTGTGCGGGACAAAAGCTACATCGGCCTTAG 999 0.3944 MGSSGSGTLFSLSSLLCDEEGEARLFKDQDENPGIFYSLDNSCFVLEDEEEYIEYLFKQETGFGSQNHHFFTSDDHSNRHWLRSARVDAIDWILNTQAKFGFKVETAYLSVTYFDRFLSKRSIDESKPWAIKLLSVASLSLAAKMEEQNVPVLSEYPMDDYRFENKVIKNMELMILSTLDWKMGSATPFSYLHYFVGKFCPGSKPQIIITKATEHIVAMVKDVNLMDQRPSLIASAAILAAFDATLTRKAMDLRLSLISSWGNVESGHVFFCYNLIQEKMKSKVKTPCSNLMSAQSSSTCVLENQSDTSSGAKRKLSFEDSENCAGQKLHRP 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01963 332 SUPERFAMILY Cyclin-like 40 183 IPR036915 -
Gma01g01963 332 PANTHER CYCLINS 52 315 IPR039361 -
Gma01g01963 332 SMART cyclin_7 91 177 IPR013763 -
Gma01g01963 332 MobiDBLite consensus disorder prediction 313 332 - -
Gma01g01963 332 Pfam Cyclin, C-terminal domain 187 298 IPR004367 -
Gma01g01963 332 ProSitePatterns Cyclins signature. 86 117 IPR006671 -
Gma01g01963 332 CDD CYCLIN 86 176 IPR013763 -
Gma01g01963 332 Gene3D - 185 249 - -
Gma01g01963 332 Pfam Cyclin, N-terminal domain 53 183 IPR006671 -
Gma01g01963 332 MobiDBLite consensus disorder prediction 303 332 - -
Gma01g01963 332 Gene3D - 79 184 - -
Gma01g01963 332 PANTHER CYCLIN-D5-1 52 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01963 Gma-Chr1 55113568 55114968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01963 11 266 Core Cell Cycle Gene Families AT4G37630 35.821 7.62e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01963 K18811 - gmx:100808000 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01963 01 55113568 55114968 Gma11g00445 11 3674035 3675443 GST