Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01962 ATGGGAAGACTAGGTGGAACCTTTGACTCTGAAACATCAGCAAGCCCAAGATGGTCAGCAAGTTTGACTGCTTATGATGCTCTCTTCTCTTGCTTACAGAATTTTGAGAGGAAGGCTTCAAAGTTTACATCAGAGAAGCATAAAGCGATGACTAGCATGGGCGAGAATTGTTTTAAGCCTCTCCAAAATACTAAGAAAATAACTCCGATGCCACCTCCCATGCCCCGTTTTGCAGCCACGAGTTGTCCTTGTAAGTGTTTGGTGTCAAAAAATTCAACACCACCAAGAGGGCGCAACAATAATGTCTCTCCAGCAGCAATAGAATTTTGGGAGCGTCTTTTTTATCAAGGTTATAAAGCAGATGTTTGCATTAATACTGATAACGGTGGCGTTGTTTATGCTCATTCTAACATTCTTGCCATGTCTACTCCTGTTTTCAGGGGCATGTTGAAGCAAGCAAATTGTCATCGTCGATGGCGAACAATCTCAATTACTGGGGTTCCACATGATGCAGTTCAAGTTTTTATTCGATTCTTATACACTTCCAGTTATGAGAAAGAAGAAATGGATGAATTCGTCCTACCTTTGTTGGTGTTGTCACATGTATACGTCGTCCCTCACTTGAAGCGTGAATGTGAACAGAAGTTAGAACTGAGTTTACTCACCATAGATAATGTGGTGGATGTATTTCAACTTGCCCTACTTTGTGATGCACCAAGACTTAGCCTTATTTGTCACCGAAAGGTGCTGAAAAACTTCAAAGTTGTTTCAGAAACAGAAGGATGGAAAACAATGAAGTTGAGCCACCCAGCTCTAGAAAAGGAAATTGTCGAGTCAATGGTCGATGAAGACATTATTAAAAAGGAGAAAATCAGAAAAAATAAGGAAAGAGAGATATATTTGCAATTATACGAGGCCATGGAAGCCCTTGTTCACATTTGTAGAGATGGTTGTCGAACTATTGGTCCTCACGACAAAGACTTCAAAGCAAACCAACCATGTAAGTATACAGCATGCAACGGATTAGAATTGCTTGTTCGTCATTTTGCTGGATGCAAGTTGAGAGTCCGTGGAGGTTGTGTTCATTGCAACAGGATGTGGCAATTATTGGAGTTACACTCTCGATTATGTGTTGATCCTGATTACTGTAGAGTTCCTTTGTGCAGGAACTTTAAAGAGCGAATATCAAAACAAAACAAGAAAGACGAAATTAGGTGGAAAATATTGGTTCAAAAGATCTTGAGAACAAGAGGAATTGGGATAGCATCATGCTTTCTGCCACAATAA 1287 0.4017 MGRLGGTFDSETSASPRWSASLTAYDALFSCLQNFERKASKFTSEKHKAMTSMGENCFKPLQNTKKITPMPPPMPRFAATSCPCKCLVSKNSTPPRGRNNNVSPAAIEFWERLFYQGYKADVCINTDNGGVVYAHSNILAMSTPVFRGMLKQANCHRRWRTISITGVPHDAVQVFIRFLYTSSYEKEEMDEFVLPLLVLSHVYVVPHLKRECEQKLELSLLTIDNVVDVFQLALLCDAPRLSLICHRKVLKNFKVVSETEGWKTMKLSHPALEKEIVESMVDEDIIKKEKIRKNKEREIYLQLYEAMEALVHICRDGCRTIGPHDKDFKANQPCKYTACNGLELLVRHFAGCKLRVRGGCVHCNRMWQLLELHSRLCVDPDYCRVPLCRNFKERISKQNKKDEIRWKILVQKILRTRGIGIASCFLPQ 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01962 428 CDD BACK 222 279 - -
Gma01g01962 428 Pfam TAZ zinc finger 304 388 IPR000197 -
Gma01g01962 428 SUPERFAMILY POZ domain 98 216 IPR011333 -
Gma01g01962 428 Gene3D Potassium Channel Kv1.1; Chain A 96 221 IPR011333 -
Gma01g01962 428 Pfam BTB/POZ domain 115 217 IPR000210 GO:0005515
Gma01g01962 428 SMART BTB_4 120 220 IPR000210 GO:0005515
Gma01g01962 428 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 55 426 IPR044513 -
Gma01g01962 428 Gene3D - 222 294 - -
Gma01g01962 428 SUPERFAMILY TAZ domain 297 397 IPR035898 -
Gma01g01962 428 SMART TAZ_2 297 389 IPR000197 -
Gma01g01962 428 Gene3D TAZ domain 295 416 IPR035898 -
Gma01g01962 428 ProSiteProfiles BTB domain profile. 120 188 IPR000210 GO:0005515
Gma01g01962 428 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 55 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01962 Gma-Chr1 55102999 55110708 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gma01g01962 BTB 2e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01962 - - gmx:100807461 761.525