Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01959 ATGGGTGAGGATTTATCATCTACGTTGGTTGTGAGAGAGTTCGACCTGAATAAAGACCGAGAGAGAGTAGAAGCCGTTGAAAGGTCGTGTGAGGTTGGACCCAGCGGCAAGCTTTCTCTCTTCACCGACATGCTCGGCGACCCAATTTGCAGGGTCCGCCATTCACCTGCTTTTCTAATGCTGGTAGCGGAGATTGGTGGAGAATTAGTAGGAATGATAAGAGGTTGCATTAAAACCGTGACATGCGGAAAAAGGCTCTCCAGAAACGGAAAACACAACAACACTAACGCCAAACACGTCCCAGTGTATACCAAAGTCGCATATATACTAGGCCTTCGTGTTTCTCCTAATCGACGTAGAATGGGAATAGGATTAAAGCTAGTGCGTAAAATGGAGACTTGGTTCAGGGATAATGGAACAGAATACTCCTACATGACAACGGAAAAGAACAATTTGGCGTCTGTTAAACTCTTCACCGATAAATGCGGGTATTCAAAGTTTCGTAACCCCTCCATCCTTGTCAACCCAGTATTTGCCCATCCAGCAAGGGTATCCCCAAAGGTGAGAATCATAAGTCTTTCCCCCTCCGAGGCCGAAGTACTCTACCGACACCATTTTGCCACGACAGAGTTTTTTCCACGCGACGTTGACTCTGTTCTGAACAACAAGTTGAACCTAGGGACGTTTCTGGCTGTCCCAAATGAGTCCTACAAGTCTGACATATGGCTCGGCCCAGATCTTTTTCTGTCGGACCCACCACATTCCTGGGCCATGGTGAGCGTGTGGAACTCAAAGGAAGTGTTCACGTTCGAGTTGCGTGGTGCGTCGCGCGTGAGCCGCACGCTTGCTAAGACAACGCGGGTGGTGGACCGGGCCCTGCCCTGGCTGCGGTTACCATCGATGCCAGACCTGTTCAGGCCGTTCGGGTTTCACTTCATGTACGGGTTGGGAGGGGAAGGCCCAGAGGGCGTGAAGATGGTGAAGGCCCTGTGTGGGTTCGCGCACAACCTCGCCATGGAAAAAGGGTGCAGGGTGTTGGCCACGGAAGTGTCCCCAAACGAGCCCTTAAGGTTTGGGATACCCCACTGGAAGATGCTGTCGGGTGAAGATTTATGGTGTATGAAGCGGTTGGGCGAGGATTACAGCGACGGTTCCGTTGGTGACTGGACCAAATCTCAACCCGGCATGTCCATTTTTGTTGACCCGAGAGAGGTCTAA 1218 0.5115 MGEDLSSTLVVREFDLNKDRERVEAVERSCEVGPSGKLSLFTDMLGDPICRVRHSPAFLMLVAEIGGELVGMIRGCIKTVTCGKRLSRNGKHNNTNAKHVPVYTKVAYILGLRVSPNRRRMGIGLKLVRKMETWFRDNGTEYSYMTTEKNNLASVKLFTDKCGYSKFRNPSILVNPVFAHPARVSPKVRIISLSPSEAEVLYRHHFATTEFFPRDVDSVLNNKLNLGTFLAVPNESYKSDIWLGPDLFLSDPPHSWAMVSVWNSKEVFTFELRGASRVSRTLAKTTRVVDRALPWLRLPSMPDLFRPFGFHFMYGLGGEGPEGVKMVKALCGFAHNLAMEKGCRVLATEVSPNEPLRFGIPHWKMLSGEDLWCMKRLGEDYSDGSVGDWTKSQPGMSIFVDPREV 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01959 405 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 183 IPR000182 GO:0016407
Gma01g01959 405 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 49 165 IPR016181 -
Gma01g01959 405 PANTHER N-ACETYLTRANSFERASE 8 404 - -
Gma01g01959 405 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 8 404 - -
Gma01g01959 405 Gene3D - 18 169 - -
Gma01g01959 405 Pfam Acetyltransferase (GNAT) family 53 164 IPR000182 GO:0016407
Gma01g01959 405 CDD NAT_SF 60 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01959 Gma-Chr1 55065061 55067188 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gma01g01959 Acetyltransf_1 2.1e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01959 - - gmx:100817251 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01959 01 55065061 55067188 Gma11g00448 11 3719471 3720933 GST
Gma01g01959 01 55065061 55067188 Gma17g01490 17 14337828 14339886 PCT
Gma01g01959 01 55065061 55067188 Gma05g01057 05 30243066 30244592 PCT
Gma17g01490 17 14337828 14339886 Gma01g01959 01 55065061 55067188 PCT
Gma05g01057 05 30243066 30244592 Gma01g01959 01 55065061 55067188 PCT