Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01936 ATGCCTCCTCAAGAGACCCAACAACCTCTGTTATCGGAGGAGCAAGAAGAGACAGCCTACGATTCCTCGGAGAAGGTTGTGGTGGTCGGAATCGACGAGCACGACGGCGACTTGGAGGCGCCGCCGTTCTCATGGCGGAAGCTGTGGCTCTTCACCGGGCCCGGGTTTCTGATGAGCATCGCTTTTCTGGATCCCGGGAACCTCGAGGGGGATCTTCAGTCCGGTGCCATTGCTGGGTACTCGCTCCTGTGGCTCCTCATGTGGGCCACGGCTATGGGCCTTCTTATCCAGCTTCTATCGGCTCGGCTCGGCGTGGCTACGGGGAGACACTTAGCCGAACTCTGCAGGGAAGAGTATCCCACATGGGCTAGGATTGTTCTGTGGTTGATGACTGAGGTTGCTCTTATTGGCGCTGACATACAAGAGGTTATTGGGAGCGCTATTGCTATCAGGATTCTCAGTAACGGCGTCGTTCCGCTCTGGGCCGGGGTCGTCATTACAGCTTTTGATTGTTTTATTTTTCTCTTTCTTGAGAACTATGGTGTGAGGAAACTGGAAGCGTTTTTCGGTGTTCTTATTGGTGTAATGGCTCTCTCATTTGCTTGGATGTTTGGTGAAGCTAAGCCCAATGGTGTTGATGTTCTTGTTGGTATTTTGGTTCCTAAACTTAGCTCCAGAACTATACAACAAGCTGTTGGAGTTGTGGGTTGCGTTATTATGCCTCACAATGTTTACTTGCATTCTGCGCTTGTTCAATCAAGAAGGGTTGACCCCAGCAAGAAAGGCCGTGTTCAGGAAGCTCTTAATTACTACTCCATAGAGTCCACCATCGCCCTTATAGTGTCCTTTGTCATTAATATATTTGTCACAACTGTGTTTGCTAAGGGCTTTTATGGTACTGAAATAGCAAATAGCATTGGTCTTGTAAATGCAGGGCAGTACCTTCAGGAGAAGTATGGGGGTGGACTATTCCCAATCCTGTATATATGGGGTATTGGGTTGTTAGCAGCCGGCCAGAGTAGCACAATTACTGGTACATATGCTGGACAGTTTATCATGGGGGGTTTTCTGAATTTAAGGTTGAAAAAGTGGATGAGGGCATTGATAACACGAAGTTTTGCCATCATCCCAACCATGATAGTTGCTCTTATATTTGATACCTCAGAGGAATCATTAGATGTTCTGAATGAATGGCTTAATGTTCTCCAGTCAGTTCAAATCCCCTTTGCACTTGTTCCCTTGCTTTGCTTGGTGTCCAAAGAACAGATAATGGGCAGTTTCAGAATTGGCCCTGTCCTCAAGATTATTTCCTGGCTTGTGGCTGCTCTGGTGATAGTGATAAATGGCTATCTATTGCTGGAATTCTTCTCTTCTGAAGTGAATGGGGCAGTGTTTGCCACTGTAGTGTGTGTATTAACAGCTGCGTATGTTGCATTTGTACTTTACCTTATTTCACGGGCCATTACCTATACACCGTGGCAAAGGTTAACCCGATCAAAGACAGTTGCTACCACAGTGAATTGA 1524 0.4698 MPPQETQQPLLSEEQEETAYDSSEKVVVVGIDEHDGDLEAPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGRHLAELCREEYPTWARIVLWLMTEVALIGADIQEVIGSAIAIRILSNGVVPLWAGVVITAFDCFIFLFLENYGVRKLEAFFGVLIGVMALSFAWMFGEAKPNGVDVLVGILVPKLSSRTIQQAVGVVGCVIMPHNVYLHSALVQSRRVDPSKKGRVQEALNYYSIESTIALIVSFVINIFVTTVFAKGFYGTEIANSIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSFAIIPTMIVALIFDTSEESLDVLNEWLNVLQSVQIPFALVPLLCLVSKEQIMGSFRIGPVLKIISWLVAALVIVINGYLLLEFFSSEVNGAVFATVVCVLTAAYVAFVLYLISRAITYTPWQRLTRSKTVATTVN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01936 507 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 7 507 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma01g01936 507 PRINTS Natural resistance-associated macrophage protein signature 127 153 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma01g01936 507 PRINTS Natural resistance-associated macrophage protein signature 157 176 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma01g01936 507 PRINTS Natural resistance-associated macrophage protein signature 182 203 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma01g01936 507 PRINTS Natural resistance-associated macrophage protein signature 231 254 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma01g01936 507 PRINTS Natural resistance-associated macrophage protein signature 338 357 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma01g01936 507 PRINTS Natural resistance-associated macrophage protein signature 366 383 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma01g01936 507 PRINTS Natural resistance-associated macrophage protein signature 400 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma01g01936 507 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 7 507 - -
Gma01g01936 507 MobiDBLite consensus disorder prediction 1 21 - -
Gma01g01936 507 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 46 424 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma01g01936 507 Hamap Divalent metal cation transporter MntH [mntH]. 34 456 IPR001046 GO:0016020|GO:0030001|GO:0046873
Gma01g01936 507 Pfam Natural resistance-associated macrophage protein 69 430 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01936 Gma-Chr1 54853111 54856657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01936 1 493 Inorganic Solute Cotransporters AT2G23150 79.084 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01936 K21398 - gmx:100807811 996.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01936 01 54853111 54856657 Gma11g00470 11 3899120 3902470 GST
Gma01g01936 01 54853111 54856657 Gma17g01523 17 15135044 15139687 PCT
Gma01g01936 01 54853111 54856657 Gma05g01020 05 29466849 29471754 PCT
Gma17g01523 17 15135044 15139687 Gma01g01936 01 54853111 54856657 PCT
Gma05g01020 05 29466849 29471754 Gma01g01936 01 54853111 54856657 PCT