Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01926 ATGCCTCAACCACATTCTCCCTCTTTCCTCCTCTGTCAACAACACTACTCTTTCTCTTTCCAACAACATTCTCAAACTCTCACCCCACCTTCACCTTTCACTTTTCCCGACAACCACCAACACGACCACCTTCTCTCTCTACTCTCCAAACAGCGCGCCACGCATTCCTCTTTCTCCCCTCGCCACGACGTCGTTCGTTGGATTTCCACAGTCTCCGACTTCCACGCCTTCGCTCCTCTCACCACCGTTCTCGCCGTTAACTACTTCGACAGGTTCGTCACCACCCTAAGGTTTCAGAGCGAACAAAAACCATGGATGACTCACCTGGCAGCACTTGCTTGCGTCTCTCTCGCCGCCAAAGTGGAGGAGACACGAGTGCCACTTCTTTTTGACTTCCAAGTGGGGGAATCGAAATTCTTGTTTGAAGCAAAGACTATACAGAAAATGGAGCTCCTAGTGTTGTCCACTCTCGAATGGAAAATGAACCCTGTCACCCCAATTTCTTTCTTCCAACACTTCCTCGCTAGGCTTGGTTTAAAGCGCCACTTGCATTCGGAGTTTCTGTGTAGGTGCCAACGTCTTCTTCTCTCTGTCATTGCGGATTCAAGGGTTATGAGTTATCTTCCTTCTACACTGGCTGCTGCTATAATGATCCACATTATTAAAGAGATTGAACCATTGAATGCTACGGAGTACCAAAATCAGCTTCCTGGTTTACTTAAAACTAGTGAGGAACAAGTGAATGAGTGCTACAAACTGATTCTGGGACTTTACGTTTGCAGCAACGGCATTCACAATTTGAGGCGCAAGCGTTTGTCCGAACCTAGTAGTAGCCCAGATGGGGTCATTGATGCATCTTTCAGTTGTGACAGTTCAAATGATTCATGGACAGTTGCATCACCTTCAGTTGAGCCAGTGTTTAAGAGGAGAAAACCTCAGGACCAGCAGATGCGGTTGCCTTCAGTGAATCGAGTGGTTATTGATGTTCTAAATACTCCTCGTTAA 1005 0.4697 MPQPHSPSFLLCQQHYSFSFQQHSQTLTPPSPFTFPDNHQHDHLLSLLSKQRATHSSFSPRHDVVRWISTVSDFHAFAPLTTVLAVNYFDRFVTTLRFQSEQKPWMTHLAALACVSLAAKVEETRVPLLFDFQVGESKFLFEAKTIQKMELLVLSTLEWKMNPVTPISFFQHFLARLGLKRHLHSEFLCRCQRLLLSVIADSRVMSYLPSTLAAAIMIHIIKEIEPLNATEYQNQLPGLLKTSEEQVNECYKLILGLYVCSNGIHNLRRKRLSEPSSSPDGVIDASFSCDSSNDSWTVASPSVEPVFKRRKPQDQQMRLPSVNRVVIDVLNTPR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01926 334 PANTHER CYCLINS 28 316 IPR039361 -
Gma01g01926 334 Pfam Cyclin, C-terminal domain 164 262 IPR004367 -
Gma01g01926 334 SUPERFAMILY Cyclin-like 146 259 IPR036915 -
Gma01g01926 334 SMART cyclin_7 172 256 IPR013763 -
Gma01g01926 334 SMART cyclin_7 66 155 IPR013763 -
Gma01g01926 334 Pfam Cyclin, N-terminal domain 48 162 IPR006671 -
Gma01g01926 334 Gene3D - 163 252 - -
Gma01g01926 334 SUPERFAMILY Cyclin-like 41 162 IPR036915 -
Gma01g01926 334 Gene3D - 57 162 - -
Gma01g01926 334 SMART Cyclin_C_2 164 280 IPR004367 -
Gma01g01926 334 CDD CYCLIN 61 154 IPR013763 -
Gma01g01926 334 PANTHER CYCLIN-D3-2 28 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01926 Gma-Chr1 54777639 54778932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01926 42 324 Core Cell Cycle Gene Families AT5G67260 49.175 7.17e-94 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01926 K14505 - gmx:100802683 671.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01926 01 54777639 54778932 Gma11g00479 11 4013612 4015682 GST
Gma01g01926 01 54777639 54778932 Gma10g02487 10 52256917 52258977 PCT
Gma01g01926 01 54777639 54778932 Gma20g01217 20 39023711 39026146 PCT
Gma17g01549 17 15735804 15737772 Gma01g01926 01 54777639 54778932 PCT
Gma05g00959 05 27991145 27992594 Gma01g01926 01 54777639 54778932 PCT