Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01884 ATGTCATCTCAGGTCGGTGTCAGGACACGAGCCCGAGCCGCATTAGCCATGGAAGCTGCTACTGCCAGTTCAGCTCAACCCTCTTCGAAGAGAAAGAAGATCTACGACACTAACCATGTGGCAAAACTCTCCAAAACTCCGAGAACAAGTTCTTCCTCCTTCTTCATACCTGCGACGGTGACGGAGATTGTTCAGGAACGCTGCCTCAGCCCTACCTCCAGTGAAATTCCGGCTTCTTGCTGCTCCAGCAACGGATCCATTGGCCTCGATGAGGATAGGATCAAGCTCTTAGATCTGGAGGTGGAGAGCGCGCAAGTTGAAACGTCGACGTGCAATGGTGGTCAAGAAATTGAGAGGAGAGAGATGAAAAGTTCCAGCGAGCTTCGAGAGAATTCACAGGAGCCGGAGCCAATGGAGATCAATTCTCACCGTGCCTTATCAAAGGCAAAAGCCATGCCTACCGAGTTGGAGCTCGAGGAATTCTTCGTTGCTGCGGAGAAGGACATTCAGAAACGATTTCAAGACAAGTACAATTATGATATTGTTAAGGACGTACCACTGGAAGGACGCTACGAGTGGGTTCAGTTGAAGCCATGA 597 0.5008 MSSQVGVRTRARAALAMEAATASSAQPSSKRKKIYDTNHVAKLSKTPRTSSSSFFIPATVTEIVQERCLSPTSSEIPASCCSSNGSIGLDEDRIKLLDLEVESAQVETSTCNGGQEIERREMKSSSELRENSQEPEPMEINSHRALSKAKAMPTELELEEFFVAAEKDIQKRFQDKYNYDIVKDVPLEGRYEWVQLKP 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01884 198 Pfam Cyclin-dependent kinase inhibitor 152 196 IPR003175 GO:0004861|GO:0005634|GO:0051726
Gma01g01884 198 MobiDBLite consensus disorder prediction 107 148 - -
Gma01g01884 198 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 3 198 - -
Gma01g01884 198 Gene3D p27 141 198 IPR044898 -
Gma01g01884 198 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 3 198 IPR044275 GO:0004861|GO:0045736|GO:0051726
Gma01g01884 198 PIRSF CKI_KRP_plant 2 198 IPR044275 GO:0004861|GO:0045736|GO:0051726
Gma01g01884 198 MobiDBLite consensus disorder prediction 114 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01884 Gma-Chr1 54392245 54393971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01884 153 198 Core Cell Cycle Gene Families AT1G49620 69.565 2.31e-18 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01884 - - gmx:548057 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01884 01 54392245 54393971 Gma11g00519 11 4349046 4350852 GST
Gma01g01884 01 54392245 54393971 Gma17g01629 17 18841343 18843085 PCT
Gma01g01884 01 54392245 54393971 Gma05g00873 05 19921805 19923306 PCT
Gma17g01629 17 18841343 18843085 Gma01g01884 01 54392245 54393971 PCT
Gma05g00873 05 19921805 19923306 Gma01g01884 01 54392245 54393971 PCT