Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01870 ATGGAGTTTAAATCTAATAATATGCTTCTTTTTGTTTCAATATTTTGGTTTGTGTTCCTTAGTCCTTTAGTGAACTGTCAACTTTATTATAATTTCTATGACACAACATGTCCAAACCTGACCGGAATTGTTCGAGACAACGTGCGGTCAGCTATGGCCAAGGACGCAAGGATTGCTGCTTCTCTCCTGCGCCTTCATTTCCATGATTGTTTCGTCATTGGATGTGATGCTTCTGTGCTACTTGATGATACGGGCACTTTAAAGGGGGAGAAAAATGCACTGCCTAATAAAAATTCACTCAGAGGATTTGAGGTCATTGACACAATCAAGGCTGCATTGGAGAAGGCTTGTCCCTCCACTGTTTCTTGTGCTGATATACTTACTCTAGCGGCAAGAGAAACTGTTTATCTAAGTAAAGGTCCATTTTGGTATGTGCCTCTGGGTCGTAGAGATGGTACAACAGCAAGTGAGAGCGAGGCAAATAACTTGCCATCACCCTTCGAACCAGTAGAAAACATTACCGCCAAGTTTATATCCAAGGGTCTTGAAAAGAAGGATGTGGCAGTACTCTCAGGTGCACACACTCTTGGCTTTGCTCAATGCTTCTCGTTCAAGCCAAGGCTCTTCGACTTTGGTGGCTCTGGTAAATCTGATCCATCACTTGATGTTTCACTTCTACAAAATTTAGTGAAATTGTGTCCAAATCAAGCTGACTCTGACACCAATTTGGCTCCCTTGGATCCCGTCACCACCAACACATTTGACAACATGTATTACAAAAACATTGTGAACAATTCGGGGCTGCTTCAATCAGACCAGGCTCTTTTAGGTGACAGCACAATTGCTTCATTAGTCAACGTGTATAGCAAGTGGCCTATTATGTTCTTCAGAGACTTTGCGGTATCTATGGAGAAAATGAGCCGCATAGGTGTACTCACAGGATCACGGGGGCAAATAAGGACTAACTGTAGGGCTGTTAACTAG 984 0.4278 MEFKSNNMLLFVSIFWFVFLSPLVNCQLYYNFYDTTCPNLTGIVRDNVRSAMAKDARIAASLLRLHFHDCFVIGCDASVLLDDTGTLKGEKNALPNKNSLRGFEVIDTIKAALEKACPSTVSCADILTLAARETVYLSKGPFWYVPLGRRDGTTASESEANNLPSPFEPVENITAKFISKGLEKKDVAVLSGAHTLGFAQCFSFKPRLFDFGGSGKSDPSLDVSLLQNLVKLCPNQADSDTNLAPLDPVTTNTFDNMYYKNIVNNSGLLQSDQALLGDSTIASLVNVYSKWPIMFFRDFAVSMEKMSRIGVLTGSRGQIRTNCRAVN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01870 327 Gene3D Peroxidase, domain 2 164 306 - -
Gma01g01870 327 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 CDD secretory_peroxidase 27 326 IPR033905 GO:0004601|GO:0042744
Gma01g01870 327 PANTHER PEROXIDASE 72-RELATED 12 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
Gma01g01870 327 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 SUPERFAMILY Heme-dependent peroxidases 27 327 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 ProSiteProfiles Plant heme peroxidase family profile. 27 327 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 Pfam Peroxidase 44 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gma01g01870 327 PANTHER PEROXIDASE 12 326 - -
Gma01g01870 327 Gene3D - 31 327 - -
Gma01g01870 327 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01870 Gma-Chr1 54260643 54262527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01870 27 323 Peroxidase AT1G49570 62.333 7.90e-129 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01870 K00430 - gmx:100786765 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01870 01 54260643 54262527 Gma11g00535 11 4452065 4453911 GST