Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01869 ATGCGTTGGTTCCCCACCCTCATCTTCTCCCATTCtcattctcattctaattcaccatcatcaacatcatcatcgttgtcgtcgtcgtcatcatcatccttatcttcttcggcgactctaaagTCTTCCCCTTCTACGTCCTCCGCCTCCGACCCCACCAGGAAGAACAGCGGCTCGGCCTGGTTCTTCGGCAGCGGGAAAAGGTCGACGTGGAAGCGCTCCAAGAAGCTAACCCACGTCGCCGTCTTAGACTCCCTTGTGGTGCCCCCCTTGTCTCGCTCCTCCAGCACCTTCGATCGTTCCTCCACCTCCTGCGTTCAGCCTCAGCCGTTGCCCTTGCCCAGAGACGCTGATTACCGTTCGCCCTCGCCTAAAGATGCCGCCGACAGACCTGACGCCGCCGTCGATGTCACCCTCACCCCTGGTTTTCGAATGCGCAGTGTTTTTGCGAGGCAAGAAACAAGGTCAGCAGGGGTGGTGGCTGAGCAAGAGAGGAGTGAAGGAGATAAGTTTTGGTTGAGCGTCCCTCCAAGAAGTGCTCCAACGAGTCCTTTGGGCAGTCCCAGCAACAAAAACGATGATGATTTGGTTCCATACTATTACGTCTCACCCAAAGGAAACCAGTTCTGGTCTGCACCAGAGATGCCCACATTTGACTCTTCCCACCCACCTCCCGCCTTCTTTGATTTATCCGCATTACACACCGATAACATTCCTTCTCCCCACCAAAGCCCAACTAGGCTTTCTTCCTTATCCATTCCTCCCAAGTTATCCCTTGACACCTCTATAGCACGTCGTGAAACCACTGCTCCTCTCGCTGTTCACCCCTTACCCTTGCCTCCTTGGGCTGGGCCTGGGCCCCCCTTGCTTTCACCATCTTCTACCTTTTCCCCACCTGTGGCTAAGACTGAATCCTTGCCCATGAAAAACCAGTGGCAAAAAGGAAAACTTCTTGGTCGTGGTACTTTTGGAACTGTTTATGTTGCCACCAACAGAAAAACTGGAGCATTGTGTGCAATGAAGGAAGCAGAAATATTTTCTGATGATCCAAAGTCTGCAGAGTGCATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCCATCTGCAACATCCAAACATCGTGCAGTATTATGGTAGCGAAATAGTAGAAGACAGGTTTTATATTTATTTGGAATATGTCCATCCCGGTTCAATGAATAAATACGTTCGTGAACATTGTGGTGCAATAACAGAATGTGTTGTTCGGAATTTCACGCGCCACATTCTTTCGGGCTTGGCTTACTTGCATAGCAAAAAAACAATTCATAGGGACATCAAAGGAGCTAACTTGCTTGTTGATTCTGCTGGTGTTGTTAAGCTTGCTGACTTTGGGATGGCCAAGCACCTAACTGGACATGTTGCAGATCTTTCTTTAAAGGGAAGTCCATATTGGATGGCTCCAGAGCTTTTTCAAGCGGGTGTGCAAAAAGATAACAGCTCTGACCTAGCttttgctgttgatatttggagtttgggttgtacaattattgaaatgttcaccgggaagcctccttggagtgagtacgaaggaGCCGCAGCTATGTTTAAGGTAATGAAGGATACTCCTCCTATTCCAGAAACATTGTCGGCAGAGGGTAAAGATTTCCTGAGACTTTGCTTTATAAGAAATCCAGCAGAGCGACCAACTGCTTCAATGTTACTACAACATCGATTTCTGAAAAACTTGCAACAACCAGATGTTTCATCTTCCATGCAGCTGTATAATGGAACATCCTTGATGGATATCCATAGTCCCAAAGAGTTGTCTGAAAATAAACTTGATCAAATTTCTATTCCCAGTGCACATATTGCTAAAGGAAAATTAGCCACTGAGAGTGCGAGAGAGAAGGTGAATGAGCCATGGAACCTCCTCCATCACAATCCATTGAAGTTTCTGGCACCGGATGCCAAGCTGGGGATGATACACAAGACAAGATCATTAATGAATGGTTGTCTTGCTGCTATGACTGTACACAGGGTATCTTCGATTTCTTGTGCTGCAACTTTTGTTAGAAGTCTTTAG 2064 0.436 MRWFPTLIFSHSHSHSNSPSSTSSSLSSSSSSSLSSSATLKSSPSTSSASDPTRKNSGSAWFFGSGKRSTWKRSKKLTHVAVLDSLVVPPLSRSSSTFDRSSTSCVQPQPLPLPRDADYRSPSPKDAADRPDAAVDVTLTPGFRMRSVFARQETRSAGVVAEQERSEGDKFWLSVPPRSAPTSPLGSPSNKNDDDLVPYYYVSPKGNQFWSAPEMPTFDSSHPPPAFFDLSALHTDNIPSPHQSPTRLSSLSIPPKLSLDTSIARRETTAPLAVHPLPLPPWAGPGPPLLSPSSTFSPPVAKTESLPMKNQWQKGKLLGRGTFGTVYVATNRKTGALCAMKEAEIFSDDPKSAECIKQLEQEIKVLSHLQHPNIVQYYGSEIVEDRFYIYLEYVHPGSMNKYVREHCGAITECVVRNFTRHILSGLAYLHSKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGHVADLSLKGSPYWMAPELFQAGVQKDNSSDLAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSAEGKDFLRLCFIRNPAERPTASMLLQHRFLKNLQQPDVSSSMQLYNGTSLMDIHSPKELSENKLDQISIPSAHIAKGKLATESAREKVNEPWNLLHHNPLKFLAPDAKLGMIHKTRSLMNGCLAAMTVHRVSSISCAATFVRSL 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01869 687 MobiDBLite consensus disorder prediction 10 69 - -
Gma01g01869 687 MobiDBLite consensus disorder prediction 10 64 - -
Gma01g01869 687 Gene3D Transferase(Phosphotransferase) domain 1 308 612 - -
Gma01g01869 687 SMART serkin_6 312 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01869 687 Pfam Protein kinase domain 313 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01869 687 ProSiteProfiles Protein kinase domain profile. 312 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01869 687 MobiDBLite consensus disorder prediction 159 192 - -
Gma01g01869 687 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 625 - -
Gma01g01869 687 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 625 - -
Gma01g01869 687 SUPERFAMILY Protein kinase-like (PK-like) 295 597 IPR011009 -
Gma01g01869 687 MobiDBLite consensus disorder prediction 92 131 - -
Gma01g01869 687 MobiDBLite consensus disorder prediction 92 109 - -
Gma01g01869 687 ProSitePatterns Protein kinases ATP-binding region signature. 318 341 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01869 Gma-Chr1 54249965 54257431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01869 149 610 MAP Kinase Kinase Kinase AT5G66850 61.155 0.0 596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gma01g01869 Pkinase 3.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01869 - - gmx:100793654 1107.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01869 01 54249965 54257431 Gma11g00536 11 4461250 4465476 GST
Gma01g01869 01 54249965 54257431 Gma17g01653 17 19631188 19636421 PCT
Gma17g01653 17 19631188 19636421 Gma01g01869 01 54249965 54257431 PCT