Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01863 ATGGAAGATCTGTTCAGTGGAGGTGCTGTGGGAGCAGTGATGGGGGAGTTACTGAAAGGGGCTATTGCGACCATAAACAAAGGTCGAGACTTCAGACCCACCCTCGAGAGCAACATAGAAACCTTAAACTCTCTGGCTCCTCAAGTGGAGGAGATGAAGCGTTACAACAAGATGCTGGATCGCCCCATAGAGGAGATAGAGAGGTTGGAGTCTCAAATGCGAGCTGGCGAAGAGCTTGTTCGCAAGTGCTCCAAATTCGGTCGCTGGAGAATGCTCTCTTTCCCGTATTACCAGAGCAAGCTTCGGAGCAAGGACGAGGCTTTGAAGAGGCACTTTTCGGTGAACGTTTCGGCGGAGAACAAGAGGGACTTGATGGAGATCGTGGCCAGTGTGAGACAGATTCTGGATATTCTGTCCAAGAAGGAGGGTTTTGGGCATTCGTTCCATTTAAGGGGTCTAAGTGGGGCCCCCCAAGAACCGGAGTGTGTGGGAATGGATGTGCCTATGAGCAAGTTGAGGATTGACTTGCTCAAGGATGGTGTGTCCGTTCTTGTCTTGACTGGTTTGGGGGGATCGGGGAAAAGCACGTTGGCTAAGAAGATCTGTTGGGACCCTCAAGTCAAAGGCAAGTTTGGGGGAAACGTCTTCTTTGTCACCGTCTCAAAGACACCCAACTTGAAGAACATTGTAGAGACACTGTTTGAACACTGTGGTTGTCCGGTGCCTAAGTTTCAAAGCGATGAAGATGCAATCAATCGATTGGGATTTCTGCTGAGGCTTGTTGGGAAAAATCCAATATTGTTGGTCTTGGATGATGTTTGGCCTAGCTCAGAAGCTCTTGTTGAGAAGTTTAAACTAGACATACCTGATTACAAGATTTTGGTGACTTCAAGGGTTTCATTTCCTAGATTTGGCACTCCATGCCAGTTGGATAAACTTGATCATGATCATGCGGTCGCCCTTTTCTGTCACTTTGCACAGCTGAATGGCAAGAGCTCATACATGCCTGATGAAAATCTTGTCCACGAGATTGTGAGAGGTTGTAAGGGTTCACCATTGGCGCTTAAGGTCACCGCAGGGTCACTCTGTCAGCAGCCTTATGAGGTGTGGCAAAATATGAAGGATTGTTTGCAAAGTCAATCCATTCTGCTGGAGTCTAGTAGTTCTGATTTGCTTTTTCGTCTTCAACAAAGTTTAGATATATTGGAGGATAAGTTCAAAATCAACGAAAAGGTGTGCTTCGAGGATCTGGGGCTATTTCCTGAAGATCAAAGGATCCCTGTTGCTGCCCTTATTGATATGTGGTCAGAACTGCATAACCTTGACGAAAATGGTAGGAATGCAATGACCATCGTCCATGATCTAACCATCAGGAATTTGATTAATGTCATAGTTACAAGGAAAGTAGCAAAGGATGCAGACATGTACTACAATAACCATTTCGTTATGCTGCATGATCTCCTTAGAGAGCTAGCAATCCGTCAAAGCGAAGAAAAACCATTTGAACAGAGAGAAAGACTGATTATTGACTTAAGTGGAGATAATCGTCCTGAATGGTGGGTAGGACAGAATCAGCAAGGAATCATTGGCCGTACTTTTTCATTCATCCTCGGAACGTCGTATAGACAGAAACAACTAAGGGTTGCTGCTCGCATATTATCTATTTCAACTGATGAAACGTTTACTTCAGATTGGTGTGACATGCTACCTGATGAAGCTGAGGTTCTAGTTTTAAATCTTAACTCTAGCCAGTACCCATTACCGAAGTTCACAGAAAATATGAGCAAACTTAAAGTTCTGATAGTCACAAATTATGGTTTCCATCGTTCAGAATTAAACAATTTTGAGCTACTTGGTTCTTTATCTAACTTGAAAAGAATCAGATTGGAAAAGGTTTCAGTCCCTTCCCTCTGCATATTGAAGAATCTGCGAAAATTGTCCCTTCATATGTGTAATACAAGGCAGGCTTTTGAAAACTGTTCTATCCAAATCTCAGATGCAATGCCAAATCTTGTGGAGATGAGCATTGACTATTGTAATGATCTGGTTAAATTGCCCGATGGGCTGAGTAACATCACCCCATTGAAGAAGCTTAGTATCACTAACTGTCACAGGCTATCTGCATTGCCACAAGATATTGCGAAGCTGGAGAATTTGGAAGTGCTAAGGCTATGTTCTTGCTCTGATTTGGTAGAGATGCCAGATTCTGTTAAAGGGCTTAACAAGCTAAGCTGTCTTGACATCTCAGATTGTGTAAGTCTGTCCAGATTACCAGATGACATTGGTGAGTTGAAGAAGCTTGAGAAGCTCTACTTGAAGGGTTGCTCAAAACTGAGTGAATTGCCGTACTCCGTCATTAATTTTGGAAATTTAAAGCATGAAATATATGTGATCTGTGACGAAGAAATGGCTGCCTTGTGGGAAAGTTTCCCTACCATTCCCAAGTTGAAGATAGAGATATCTTCAATGGAGATTAACTTAAATTGGCTTCCAGGAGTTCATTCCTGA 2508 0.4334 MEDLFSGGAVGAVMGELLKGAIATINKGRDFRPTLESNIETLNSLAPQVEEMKRYNKMLDRPIEEIERLESQMRAGEELVRKCSKFGRWRMLSFPYYQSKLRSKDEALKRHFSVNVSAENKRDLMEIVASVRQILDILSKKEGFGHSFHLRGLSGAPQEPECVGMDVPMSKLRIDLLKDGVSVLVLTGLGGSGKSTLAKKICWDPQVKGKFGGNVFFVTVSKTPNLKNIVETLFEHCGCPVPKFQSDEDAINRLGFLLRLVGKNPILLVLDDVWPSSEALVEKFKLDIPDYKILVTSRVSFPRFGTPCQLDKLDHDHAVALFCHFAQLNGKSSYMPDENLVHEIVRGCKGSPLALKVTAGSLCQQPYEVWQNMKDCLQSQSILLESSSSDLLFRLQQSLDILEDKFKINEKVCFEDLGLFPEDQRIPVAALIDMWSELHNLDENGRNAMTIVHDLTIRNLINVIVTRKVAKDADMYYNNHFVMLHDLLRELAIRQSEEKPFEQRERLIIDLSGDNRPEWWVGQNQQGIIGRTFSFILGTSYRQKQLRVAARILSISTDETFTSDWCDMLPDEAEVLVLNLNSSQYPLPKFTENMSKLKVLIVTNYGFHRSELNNFELLGSLSNLKRIRLEKVSVPSLCILKNLRKLSLHMCNTRQAFENCSIQISDAMPNLVEMSIDYCNDLVKLPDGLSNITPLKKLSITNCHRLSALPQDIAKLENLEVLRLCSCSDLVEMPDSVKGLNKLSCLDISDCVSLSRLPDDIGELKKLEKLYLKGCSKLSELPYSVINFGNLKHEIYVICDEEMAALWESFPTIPKLKIEISSMEINLNWLPGVHS 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01863 835 PRINTS Disease resistance protein signature 183 198 - -
Gma01g01863 835 PRINTS Disease resistance protein signature 260 274 - -
Gma01g01863 835 PRINTS Disease resistance protein signature 348 362 - -
Gma01g01863 835 PRINTS Disease resistance protein signature 714 730 - -
Gma01g01863 835 SUPERFAMILY L domain-like 560 792 - -
Gma01g01863 835 Gene3D - 395 495 IPR036388 -
Gma01g01863 835 Gene3D Ribonuclease Inhibitor 545 805 IPR032675 -
Gma01g01863 835 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 3 132 IPR008808 -
Gma01g01863 835 Gene3D - 153 301 IPR027417 -
Gma01g01863 835 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 416 IPR027417 -
Gma01g01863 835 Gene3D - 312 390 IPR042197 -
Gma01g01863 835 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Gma01g01863 835 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 820 IPR039203 GO:0050832
Gma01g01863 835 Pfam NB-ARC domain 171 396 IPR002182 GO:0043531
Gma01g01863 835 Coils Coil 52 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01863 Gma-Chr1 54167932 54172640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01863 188 781 WRKY Transcription Factor Family AT5G45050 23.758 1.42e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01863 - - gmx:100792590 1627.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01863 01 54167932 54172640 Gma11g00542 11 4521846 4526739 GST
Gma01g01863 01 54167932 54172640 Gma17g01667 17 20541184 20546064 PCT
Gma01g01863 01 54167932 54172640 Gma05g00844 05 17452968 17458092 PCT
Gma17g01667 17 20541184 20546064 Gma01g01863 01 54167932 54172640 PCT
Gma05g00844 05 17452968 17458092 Gma01g01863 01 54167932 54172640 PCT