Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01831 ATGGAAGTGCTGCCTTGTTCTGGTGTTCAATATGCTGGGGAATCTGATTGCCCTCAGCAGAGTTCAGGAACAGCATTTGTATACCAGGAACAACCTAATTGCCCCGAAAATGGTGAACATGTCAACTTTGTAGCTGCTCAACTGAATGAATCATCACATAAGATGCAAGGGCCTCAGATAGAAAGACATTTGTCGACTAATTCAGATTGCCAATGCATTGGAACTTCATGTTGTGATTGTCAAGTGGATGACCAACATGAATATTGTGGTTTTCATGATTTTGAAGAAGACATGATTAATGAACCTTGCTTGACATCTGAGAACTTTATCTCTGTTGTGGATACAATTGAAATTGAATCACCAAACAACAGTAGGGAAGGAGACTTGTCATGTTCCGAACCCAAGTGGCTAGAGGGAGATGAATCTGTGGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCAGGCTGGTATCCGGTGTGCAAGGGCTGACTGGCCATTATCAACTTTGAAAGCAAAACCAACTCATGACAGAAAGAAATATTTTGTTATATTTTTTCCACACACAAGAATTTATTCTTGGGCAAACATGCTGCTTGTTAGATCAATTAATGAGTATCCCCATCCTATTGCATATAAGACTCATCAGGTGGGATTGAAAATGGTAAAAGACTTAACTGTTGCACGGCGCTTTATAATGCAAAAGCTAGTTGTTGGTTTGCTGAACATGGTCGATCAGTTTCATTTTAATGCTTTGACAGAAACTGCACGTGATGTGAAGGTCTGGAAGGAATTTGCCATGGAGGCTTCTCGTTGTAAGGGTTATTCCAATTTTGGAAGAATCCTTCTAAAGCTGCATAAAAGCATACTGCAGCACCATATAAATGCTGACTGGTTACAGCATTCTTATCTCTCTTGGGCTGAAAGATGTCAGAGTTCAAATAGCGCTGAATCAGTGGAGCtgctgaaggagGAATTGTTTGATTCTATTTTGTGGAATGGGGTCAATACTCTCTGGGATGCAGTTGCACCAATGCAATCAACATTAGGTTCTGAATGGAAAACCTGGAAGCAGGATGTGATGAAATGGTTTTCTGCACCACCTTCCTTATCGAGCAGCAAAGACACCCAGCAACAGAGTTCTGATGATTTGTACCAAGCAAACCTTCAGGTTTGTAGAAAAAGGCCCAAACTTGAAGTTCGTCGTGCAGATACACATGCTTCACAAGTGGAAATCAAGGACCAAACTATTGCTCTTGAAGCTGACCCTGGCTTCTTTAAGAATCAGGACACGTTGAGCACAATAGCAGCTCAGTCTTGCAAACAGGAAGGTGTTAGGGAGGTGTCTATGACAACTTCACCTAGTAATTTGGCAAATAAATGGAATGAAATTGTAGTTGAGGCTACCGCTTCGGATTTCTTACATATCAAAGAAATGGAATCAACACCTACAAATGAAATGAGTGTTGCAAAATCTGTAGAACCTGGTAGTAAGAATCGACAATGTATAGCTTATATTGAAGCAAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTATACTGTTGTGTACATTTGTCCTCTCGATTTTTGGGCAGCTCAACAAAATCCGAAAAGCCTGTTCCAGTTGATACTCCAATGTGTGAAGGTACAACTGTTCTGGGTACTAGATGTAAGCATCGTGCCCTACCTGACTCTTTATTCTGTAAGAAACACAGGCCACATGCTGAAACAGTGCAGACCTCAAATTTACCCCAGAATACACTAAAGAGGAAGCATGAAGAAAATTATACTGGTTCAAAGGACATGTATGCATTGGTAAATGTTGAGAGTCCACTGCAAGTGGATCCAGTGTCATCCATTGGTGGTGATTCTGTACATGTAGAAAGCAACTTTAATGAGAAGCCCAAGCATTCTGAAAATGATCATAATGCAGTGGTGTCAATGCACTGTATAGGTTCTCCTCCCTATGATTACAAGAATCCTTGTAGGGAAGGTCCTAAAAGGTATTGCTTGTACTGTGAAAGACACCTTCCAAGCTGGCTTAAGCGTGCTAGAAATGGGAAGAGTAGAATAGTATCAAAAGAAGTGTTCACAGAACTTTTGGGGGAATGTAGCTCGTGGGAGCAAAAGGTACATCTTCATAAAGCATGTGAACTTTTTTACAGGCTGTTCAAAAGCATTTTATCATTAAGAAATCCTGTTCCTAAGGATGTCCAATTCCAGTGGGCTTTGACTGAAGCCTCTAAAGATTCCAATGTAGGAGAGTTTTTTACAAAGTTAGTTCATAGTGAAAAGGCGAGAATCAAGTCAATATGGGGATTCAATGATGACATGGATATATCCTCTATCATGGAAGAACCACCTCTCTTGCCATCCACTATTAATGATAACTATGATGAGGAAAATGCCATCAAGTGTAAGATATGCTCTGCAGAATTTCCTGATGACCAAGCACTTGGTAACCATTGGATGGACAGTCATAAAAAGGAAGCACAGTGGCTGTTTAGAGGCTATGCATGTGCCATTTGTCTGGATTCATTTACTAACAAAAAACTATTGGAAACTCATGTTCAGGAGAGGCATCATGTGCAATTTGTTGAACAATGCATGCTTCTCCAATGCATTCCTTGTGGGAGTCATTTTGGAAATACTGAACAATTATGGCAGCATGTTTTACTAGTTCACCCTGTTGATTTTAAACCATCAACAGCTCCTAAGCAGCAAAATTTTTCTACTGGCGAAGATTCTCCTGTAAAACATGATCAGGGAAATTTAGCCCCCTTGGAGAATAATTCCGAGAATACGGGTGGTTTACGGAAATTTGTTTGCAGGTTTTGTGGATTGAAATTTGATTTACTACCTGACCTAGGTCGACATCACCAAGCTGCTCATATGGGGCCGAATCTGGCTAGCAGTCGCCCTGCAAAGAGGGGAGTTCGCTATTATGCATATAGATTAAAATCTGGCAGACTTAGCCGCCCTAAATTTAAAAAAACTTTGGCAGCAGCATCATACAGGCTCAGAAATAAGGCTAATGCTAATTTAAAGCGAGGCATTCAGGCATCAAACTCACTTGGCATGGGAGGAATAACCATACAACCTCATGTTACTGAAAGTGAAACAACAAATATTGGTAGATTGGCAGAACATCAATGCTCAGCTGTTTCAAAGATTTTGTTTTCAGAGATTCAGAAAATGAAACCTCGGCCTAACAATCTTGATATTTTATCAATTGCTCAGTCTGCTTGCTGCAAAGTTAGTCTTGCAGCCTCACTAGAGGAGAAATATGGAATCTTGCCTGAAAAGCTCTATTTGAAGGCAGCAAAACTTTGCAGTGAGAATAGTATTTTGGTAAATTGGCATCAGGAGGGGTTTATTTGTCCTAGAGCTTGTAATGTATCAAAGGATCAAGCTTTGCTCTCTCCTTTAGCTTCTCTTCCTAATAGTTCTGTAAGGCCCAAATCTGTGAATTTATCTGATCCTGCAAGTGATGAGTGGGAGGTGGATGAATTTCACTGCATCATCAATTCGCATACTTTAAAAATAGGTTCACTGCCAAAAGCTGTTATCTTGTACGATGACATTAGCTTTGGGAAGGAATCAGTTCCAGTGAGTTGTGTGGTAGATCAAGAACTTATGCATTCTCTTCATATGAATGGGTGTAACAGACAAAATATAAGCCCTTCTATGCCTTGGGAGACCTTTACCTATGTTACAAAGCCAATGCTTGATCAATCCCTTAGTCTTGACTCAGAGAGCCTGCAACTGGGATGTGCCTGCTTATGCAGTACTTGCTGTCCGGAAACTTGTGATCATGTATACCTTTTTGGCAATGACTATGATGATGCAAAAGACATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGCCGAATAATCTTAGAGGAAGGTTATCTTGTCTATGAGTGTAATCATATGTGCAGATGCAATAAATCCTGTCCAAACAGAGTATTGCAGAATGGAGTACGAGTCAAATTGGAAGTCTTTAAAACAGAGAAAAAGGGATGGGCAGTAAGGGCTGGTGAAGCTATTCTACGTGGCACATTTGTGTGTGAATACATTGGAGAAGTTTTAGATGTGCAGGAGGCACGTGATAGGCGCAAGAGATATGGCGCAGAGCATTGTAGTTATTTGTATGACATCGATGCTCGTGTTAATGATATGGGCAGATTGATTGAAGAACAAGCTCAATATGTAATTGATGCTACTAAGTTTGGAAATGTCTCAAGATTCATCAATCATAGCTGCTCACCAAATCTTGTCAATCACCAAGTTCTTGTAGAGAGCATGGATTGTGAACGTGCACATATTGGTTTTTATGCAAGTCGAGATATTGCTTTGGGTGAAGAGCTAACATATGACTATCAGTACGAGCTTATGCCTGGAGAAGGATCTCCTTGTCTTTGCGAATCCTTGAAGTGCAGGGGACGCCTTTATTAG 4479 0.4061 MEVLPCSGVQYAGESDCPQQSSGTAFVYQEQPNCPENGEHVNFVAAQLNESSHKMQGPQIERHLSTNSDCQCIGTSCCDCQVDDQHEYCGFHDFEEDMINEPCLTSENFISVVDTIEIESPNNSREGDLSCSEPKWLEGDESVALWVKWRGKWQAGIRCARADWPLSTLKAKPTHDRKKYFVIFFPHTRIYSWANMLLVRSINEYPHPIAYKTHQVGLKMVKDLTVARRFIMQKLVVGLLNMVDQFHFNALTETARDVKVWKEFAMEASRCKGYSNFGRILLKLHKSILQHHINADWLQHSYLSWAERCQSSNSAESVELLKEELFDSILWNGVNTLWDAVAPMQSTLGSEWKTWKQDVMKWFSAPPSLSSSKDTQQQSSDDLYQANLQVCRKRPKLEVRRADTHASQVEIKDQTIALEADPGFFKNQDTLSTIAAQSCKQEGVREVSMTTSPSNLANKWNEIVVEATASDFLHIKEMESTPTNEMSVAKSVEPGSKNRQCIAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSTKSEKPVPVDTPMCEGTTVLGTRCKHRALPDSLFCKKHRPHAETVQTSNLPQNTLKRKHEENYTGSKDMYALVNVESPLQVDPVSSIGGDSVHVESNFNEKPKHSENDHNAVVSMHCIGSPPYDYKNPCREGPKRYCLYCERHLPSWLKRARNGKSRIVSKEVFTELLGECSSWEQKVHLHKACELFYRLFKSILSLRNPVPKDVQFQWALTEASKDSNVGEFFTKLVHSEKARIKSIWGFNDDMDISSIMEEPPLLPSTINDNYDEENAIKCKICSAEFPDDQALGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKLLETHVQERHHVQFVEQCMLLQCIPCGSHFGNTEQLWQHVLLVHPVDFKPSTAPKQQNFSTGEDSPVKHDQGNLAPLENNSENTGGLRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNLASSRPAKRGVRYYAYRLKSGRLSRPKFKKTLAAASYRLRNKANANLKRGIQASNSLGMGGITIQPHVTESETTNIGRLAEHQCSAVSKILFSEIQKMKPRPNNLDILSIAQSACCKVSLAASLEEKYGILPEKLYLKAAKLCSENSILVNWHQEGFICPRACNVSKDQALLSPLASLPNSSVRPKSVNLSDPASDEWEVDEFHCIINSHTLKIGSLPKAVILYDDISFGKESVPVSCVVDQELMHSLHMNGCNRQNISPSMPWETFTYVTKPMLDQSLSLDSESLQLGCACLCSTCCPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRIILEEGYLVYECNHMCRCNKSCPNRVLQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVQEARDRRKRYGAEHCSYLYDIDARVNDMGRLIEEQAQYVIDATKFGNVSRFINHSCSPNLVNHQVLVESMDCERAHIGFYASRDIALGEELTYDYQYELMPGEGSPCLCESLKCRGRLY 1492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01831 1492 Gene3D SET domain 1177 1473 IPR046341 -
Gma01g01831 1492 Pfam Pre-SET motif 1197 1329 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma01g01831 1492 MobiDBLite consensus disorder prediction 906 933 - -
Gma01g01831 1492 SMART preset_2 1194 1321 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma01g01831 1492 ProSiteProfiles Zinc finger C2H2 type domain profile. 943 971 IPR013087 -
Gma01g01831 1492 ProSiteProfiles Zinc finger C2H2 type domain profile. 840 863 IPR013087 -
Gma01g01831 1492 Pfam SET domain 1348 1468 IPR001214 GO:0005515
Gma01g01831 1492 ProSitePatterns Zinc finger C2H2 type domain signature. 876 897 IPR013087 -
Gma01g01831 1492 Gene3D Classic Zinc Finger 793 866 - -
Gma01g01831 1492 ProSiteProfiles Post-SET domain profile. 1476 1492 IPR003616 -
Gma01g01831 1492 SMART set_7 1337 1475 IPR001214 GO:0005515
Gma01g01831 1492 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1492 - -
Gma01g01831 1492 ProSitePatterns Zinc finger C2H2 type domain signature. 945 966 IPR013087 -
Gma01g01831 1492 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1492 - -
Gma01g01831 1492 Pfam Zinc finger C2H2-type, 3 repeats 842 967 IPR040689 -
Gma01g01831 1492 ProSiteProfiles Pre-SET domain profile. 1258 1334 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gma01g01831 1492 ProSiteProfiles SET domain profile. 1337 1469 IPR001214 GO:0005515
Gma01g01831 1492 ProSitePatterns Zinc finger C2H2 type domain signature. 808 829 IPR013087 -
Gma01g01831 1492 MobiDBLite consensus disorder prediction 906 920 - -
Gma01g01831 1492 SUPERFAMILY SET domain 1187 1482 IPR046341 -
Gma01g01831 1492 SMART c2h2final6 840 863 IPR013087 -
Gma01g01831 1492 SMART c2h2final6 874 897 IPR013087 -
Gma01g01831 1492 SMART c2h2final6 806 829 IPR013087 -
Gma01g01831 1492 SMART c2h2final6 943 966 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01831 Gma-Chr1 53940576 53950678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01831 111 1491 C2H2 Transcription Factor Family AT2G23740 51.567 0.0 1395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma01g01831 Pre-SET 1.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01831 - - gmx:100786757 3080.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01831 01 53940576 53950678 Gma01g01831 01 53940576 53950678 ECH
Gma01g01831 01 53940576 53950678 Gma11g00570 11 4737802 4748610 GST