Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01823 ATGGCCTGTGTTCTGTTGCTGAATTGCTATCACCAAGTCTTACTGATACCAGTAACCTGTGGTTGCACTGGAAACCGTTCTTTCGCCAATATCTCCTATGAGATCAACCCCGGTGATAGCTTCAACTTTGTTGCAACCACTTCATACGAGAATCTCACGAATTGGCGTGTAGTGATGGATTTAAACCCCAGTCTAAGTCCAAATACGTTGCCAATAGGAATCCAAGTAGTATTTCCTTTATTCTGCAAGTGTCCTTCAAAGAACCAGTTGGACAAAGGGATAAAGTACCTGATTACATACGTGTGGCAGCCCAGTGACAATGTTTCCCTTGTAAGTGAAAAGTTTGGTGCATCACCAGAGGACATATTGAGTGAAAACAACTATGGTCAGAACTTTACTGCTGCAAACAACCTTCCAGTTCTGATCCCAGTGACACGCTTGCCTGTTCTTGCTCAATTTCCTTCAGATGTAAGAAAAGGCGGAATTCGTCTTCCAGTTATAATTGGTATTAGCTTGGGATGCACGCTACTGGTCGTGGTTTTAGCAGTATTACTGGTGTATGTATATTGTCTGAAAATTAAGAGTTTGAATAGGAGTGCTTCATCAGCTGAAACTGCAGATAAACTACTTTCTGGAGTTTCAGGCTATGTAAGTAAGCCTACCATGTATGAAACTGATGCGATCATGGAAGCTACCATGAACCTCAGTGAGAAGTGCAAGATTGGGGAATCAGTGTACAAGGCAAACATAGAGGGTAAGGTTTTGGCAGTAAAAAGATTCAAGGAAAATGTCACAGAGGAGTTGAAAATTCTGCAGAAGGTGAATCATGGAAATCTGGTGAAATTAATGGGTGTCTCGTCAGACAATGATGGAAATTGTTTTGTGGTTTATGAATATGCTCAAAATGGATCTCTTGATGAGTGGCTATTCTACAAGTCTTGTTCAGACACATCAGACTCAAGGGCCTCCCTTACATGGTGtcagaggataagcatagcagtggatgttgcaatgggtttgcagtacatgcatgaacatgcatatccaagaatagtccacagggacatcgcaagcagcaatatccttcttgacTCAAACTTCAAGGCCAAGATAGCAAATTTCTCCATGGCCAGAACTTTTACCAACCCCACGATGCCAAAGATAGATGTCTTTGCATTTGGGGTGGTTCTGATAGAGTTGCTTACTGGTAGGAAAGCCATGACAACCAAGGAAAATGGTGAGGTAGTTATGCTGTGGAAGGACATTTGGAAGATCTTTGATCAAGAAGAGAATAGAGAGGAGAGGCTCAAAAAATGGATGGATCCTAAGTTAGAGAGTTATTATCCTATAGATTATGCTCTCAGCTTGGCCTCCTTGGCAGTGAATTGTACAGCAGATAAGTCTTTGTCCAGATCAACCATTGCAGAAATTGTCCTTAGCCTCTCCCTTCTCACTCAACCATCTCCCGCGACATTGGAGAGATCCTTGACTTCTTCTGGATTAGATGTAGAAGCTACTCAAATTGTCACTTCCATAGCAGCTCGTTGA 1548 0.3902 MACVLLLNCYHQVLLIPVTCGCTGNRSFANISYEINPGDSFNFVATTSYENLTNWRVVMDLNPSLSPNTLPIGIQVVFPLFCKCPSKNQLDKGIKYLITYVWQPSDNVSLVSEKFGASPEDILSENNYGQNFTAANNLPVLIPVTRLPVLAQFPSDVRKGGIRLPVIIGISLGCTLLVVVLAVLLVYVYCLKIKSLNRSASSAETADKLLSGVSGYVSKPTMYETDAIMEATMNLSEKCKIGESVYKANIEGKVLAVKRFKENVTEELKILQKVNHGNLVKLMGVSSDNDGNCFVVYEYAQNGSLDEWLFYKSCSDTSDSRASLTWCQRISIAVDVAMGLQYMHEHAYPRIVHRDIASSNILLDSNFKAKIANFSMARTFTNPTMPKIDVFAFGVVLIELLTGRKAMTTKENGEVVMLWKDIWKIFDQEENREERLKKWMDPKLESYYPIDYALSLASLAVNCTADKSLSRSTIAEIVLSLSLLTQPSPATLERSLTSSGLDVEATQIVTSIAAR 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01823 515 Gene3D Phosphorylase Kinase; domain 1 213 299 - -
Gma01g01823 515 ProSitePatterns Tyrosine protein kinases specific active-site signature. 351 363 IPR008266 GO:0004672|GO:0006468
Gma01g01823 515 SMART tyrkin_6 235 481 IPR020635 GO:0004713|GO:0006468
Gma01g01823 515 ProSiteProfiles Protein kinase domain profile. 203 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01823 515 Pfam Protein tyrosine and serine/threonine kinase 260 381 IPR001245 GO:0004672|GO:0006468
Gma01g01823 515 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 10 515 - -
Gma01g01823 515 SUPERFAMILY Protein kinase-like (PK-like) 223 481 IPR011009 -
Gma01g01823 515 Gene3D Transferase(Phosphotransferase) domain 1 384 494 - -
Gma01g01823 515 Gene3D Transferase(Phosphotransferase) domain 1 300 383 - -
Gma01g01823 515 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 10 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01823 Gma-Chr1 53817842 53819389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01823 14 484 Receptor kinase-like Gene Family AT3G21630 30.608 5.81e-66 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma01g01823 PK_Tyr_Ser-Thr 2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01823 - - gmx:102669100 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01823 01 53817842 53819389 Gma01g01823 01 53817842 53819389 ECH
Gma01g01823 01 53817842 53819389 Gma11g00577 11 4856231 4858385 GST