Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01822 ATGTACAAAAAGTGGTGCATAATTGCATTCATTTCTCTGCAAACAACAATGGATCTCTTTCCCTTCATCCCCATCATCATTTTCACACTATTGATCCACAACTTCTCTCTGATTCTGGGGCAGCAACCTTACATTGGTTTAGGCACAGTAGCGTGCCCAAGAAGGGGTAACAAAAATTCTATCCGTGGTTACACTTGCAATGGTGCAAACCATAGCTGCCAAAGTTACCTCACCTTCAGATCTCAACCCATCTACAACTCTGTCAAGACAATATCAACTTTGTTGGGTTCTGACCCATCCCAGCTTGCTAAAATAAACTCAGTTTCCATGAATGACACCTTTGAAACAAACAAGTTGGTTATTGTTCCGGTCAACTGTTCCTGTGCAGGTGAGTATTATCAAACAAACACATCCTATGAGTTCCATAATTCAGAAACTTACTTCTTGATTGCCAACAATACTTTTGAGGGCCTCACAACATGCCAAGCTTTGGAGAACCAAAACCACAACCCTGCAAACATATACCCTGGTAGAAGGCTTTTAGTGCCTCTTAGATGTGCTTGTCCCACAAAGAATCAAACTGAGAAAGGCATCAGGTACCTCCTAAGTTACTTGGTAAACTGGGGTGATTCTGTTTCATTCATTAGTGAGAAATTTGGTGTCAACTTTATGACCACTCTTGAAGCTAATACACTTACTCTCACCCAAGCCACGATCTATCCCTTTACCACAATTCTAGTTCCCCTTCATGACAAGCCCTCAAGTTCTCAAACTGTTTCGCCAACTCGGCGCACTCCACCACCCTCTCCTCCCTCTTCTGATCATAGCTCAAACAAAACATGGGTGTATGTAGTTGTTGGGGTTGTTGTGGGAGCTATTGCCTTAATATCGGTTCTCTGTGCTGTCATTTTCTTCACACGCTATCGCAAAAATAGAAAGAAAGATGACTCAGTGGTAGTAGGGTCCAAGAGTTTTGAGGCAATTGAGGAAAAACCAGAAGTGAAAGTGAATGAAAAATTGTCAGAGATCATATCTGGCATAGCTCAGTCTTTCAAAGTGTATAATTTTGAGGAACTACAGCGTGCAACAGATAACTTTAGTCCTAGCAGCTGGATCAAAGGGTCTGTTTATCGCGGTGTGATTAACGGTGATTTGGCTGCAATTAAAAGGATAGAAGGAGATGTGTCAAAAGAGATAGAGATACTGAACAAAATCAACCATTCCAATGTTATACGCCTTTCCGGGGTTAGCTTCCACGAGGGGGGTTGGTACCTTGTTTATGAGTATGCCGCTAATGGGGACTTGAGTGAATGGATCTACTTCCACAACGTGAATGGGAAATTTCTGAGTTGGACGCAGAGAATGCAGATTGCATTGGATGTGGCCACAGGACTTGACTATCTTCACAGTTTCACTTCTCCTCCTCATATCCACAAGGATATAAACAGCAGTAACATTCTTCTGGATGGTGATTTCAGGGGAAAGGTCACGAATTTAAGCCTTGCTAGGTGTTTGGAAGGAGGGGACGATCAACTTCCCGCGACGAGGCACATTGTTGGGACAAGAGGCTACATGGCTCCAGAGTATTTGGAAAATGGTCTTGTGTCTACAAAGCTTGATGTGTATGCATTTGGGGTACTTATGCTGGAAATGGTCACTGGAAAAGAGGTTGCTGCTATTTTAACTGAAGATGAGACAAAATTGTCACATGTTTTAAGTGGCATACTTGGTGAGGAAAGTGGCAAGGAGATGTTGAAGGAGTTTGTGGATCCCTCTTTGGGAGAAAATTGTCCATTGGAACTTGCTATGTTTGTGATTGAAATGATTGATAATTGCATAAAGACAGATCCGGCAAGTCGCCCTAGTGTGCATGAGATTGTGCAATCTATGTCAAGAACCCTGAAGTCTTCACTGAGTTGGGAAAGGTCAATGAATGTCCCACGAAATTAA 1950 0.4251 MYKKWCIIAFISLQTTMDLFPFIPIIIFTLLIHNFSLILGQQPYIGLGTVACPRRGNKNSIRGYTCNGANHSCQSYLTFRSQPIYNSVKTISTLLGSDPSQLAKINSVSMNDTFETNKLVIVPVNCSCAGEYYQTNTSYEFHNSETYFLIANNTFEGLTTCQALENQNHNPANIYPGRRLLVPLRCACPTKNQTEKGIRYLLSYLVNWGDSVSFISEKFGVNFMTTLEANTLTLTQATIYPFTTILVPLHDKPSSSQTVSPTRRTPPPSPPSSDHSSNKTWVYVVVGVVVGAIALISVLCAVIFFTRYRKNRKKDDSVVVGSKSFEAIEEKPEVKVNEKLSEIISGIAQSFKVYNFEELQRATDNFSPSSWIKGSVYRGVINGDLAAIKRIEGDVSKEIEILNKINHSNVIRLSGVSFHEGGWYLVYEYAANGDLSEWIYFHNVNGKFLSWTQRMQIALDVATGLDYLHSFTSPPHIHKDINSSNILLDGDFRGKVTNLSLARCLEGGDDQLPATRHIVGTRGYMAPEYLENGLVSTKLDVYAFGVLMLEMVTGKEVAAILTEDETKLSHVLSGILGEESGKEMLKEFVDPSLGENCPLELAMFVIEMIDNCIKTDPASRPSVHEIVQSMSRTLKSSLSWERSMNVPRN 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01822 649 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 25 645 - -
Gma01g01822 649 MobiDBLite consensus disorder prediction 252 277 - -
Gma01g01822 649 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 25 645 - -
Gma01g01822 649 Gene3D Transferase(Phosphotransferase) domain 1 430 643 - -
Gma01g01822 649 Pfam Protein kinase domain 382 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01822 649 SUPERFAMILY Protein kinase-like (PK-like) 348 629 IPR011009 -
Gma01g01822 649 Gene3D Phosphorylase Kinase; domain 1 336 429 - -
Gma01g01822 649 Pfam LysM domain 204 248 IPR018392 -
Gma01g01822 649 ProSiteProfiles Protein kinase domain profile. 314 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01822 649 ProSiteProfiles LysM domain profile. 202 247 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01822 Gma-Chr1 53813368 53815686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01822 25 643 Receptor kinase-like Gene Family AT2G23770 43.582 1.66e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Gma01g01822 Pkinase 4.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01822 - - gmx:100815842 1244.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01822 01 53813368 53815686 Gma01g01822 01 53813368 53815686 ECH
Gma01g01822 01 53813368 53815686 Gma11g00578 11 4861067 4862971 GST