Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01818 ATGGCGTTCAGGAAAACCCTTGCTCAACGGCTCCTTAACATCACCAAAGTGTCATCACAAGCGCTCACCAATTGTCGGATTTCCTCTTCCTCCGTCATCGGAAGGCTTTCACCGCGGGCCGACGAGCCCGTTGATCCCGGAGAAAATGGCCTCTTCCGTGCGCCGCAACTCGCCGGAAACCTCCTCGACAGGCTCAGGACGATGGGTATTGCCCACAACCGGATCCGGTTGGATGGGTTGACGCCGCCTCCGCCGATGGAAATGGTGGACACAGTCACCGTCAAGGACGCGAGAAAATTGCTAAAGGTGGCGCAGGTGGAGATGGTGAAAGCGAAGCTGAGAGAGACCCGAAAGAGTTGCATAACGTTCTCGGAGTTCATTGGGATCTGCGATGAGCATTGCTCGGATCAGGATCAAGCGGTGGAGATTGCAAAGATGTTGGACAATTCCGCGGCTGTGATTGTGTTGGGAGATGTCGTGTTTCTCAGACCCGAACAGGTAGCAAAAGCCATCCAAGGTCTTCTCCCTGTACCAGGAGCCAAGGCGCACGAGTCGGTAAGAAGAGAATTCGAAGTAATGGAGAAAAAGAAGTCAGCCATTGACAAGAAAGCAGACACCATGGTTCGGCGTGAGCTCTGGGGAGGGTTAGGTTTTATGATGGTGCAAACAATGGCATTCATGAGGCTTACGTTTTGGGAACTCTCCTGGGATGTGATGGAACCCATATGCTTCTATTTGACCTCAATGTACTGCATGGCAGGCTACACCTTCTTCCTAAGGACCTCAAAAGAACCTTCCTTTGAAGGCTTCTACCAAGTCCGGCTGCTTGCTCTCCCACCACCATGCCTCCAAAGTTTGATCCCTCCATTGCTCTCCCATTTGACAATTCTTCCATTCATCAATGATATTGAAGAATACAGCACATTGCTGTCTCCTTCGGCAAATTTGGGGTTACAATCCCCTCCACCGATTCATCCCCTTAATGATCTTTCATTGAGTTACAAGATTCAAGAAGGAGCAAATATTCTGCGGGAGGAACCTGGAAACTTCCACGAGGTTTTCGGTGAAAACCAAATTTGGGGCTTTGCATCGCAAGATTTACCCTTTCCAATCAAAATTCTTCTGCCTTCCCCTACCAATTCTTTCTCTCAACCGATTTATCTGAGTGAGGGGTGGCTCCACCATCACTCCCATTCTCAGGAATGCCCTGTTTGCAAGGCCCTTGTGCAGGAAGAGAAATTGGTTCCTCTTTATGGAAGGGGCAAAACACAGACTGATCCCAGGACCAAGTCATATCCTGGAATGGAGATCCCCCACCGTCCTTCCGGGCAGAGGCCGCAAACCGCGCCACCCCCGCCACCTCCTGAGGCTAACCCTTTCGGGAGTTATGGGTTTGGACTAATGGGAGGGTTCATTCCTATGGCAACTGCTCGATTTGGAAACTTCACGCTTTCCACTGCCTTTGGCGGGTTTATCCCGTCCCTACTCAACATTCATTTCCATGGGTTTCAGGATGCCACTGTCTATGGGACAACGTCTGGTTATCCCTTTGGGTTTAATGGCTTTCATGGAGGGAACACGCGGGGTTTTACGCAGGCAACTGGTCAAGTGCAGCGGCAGGAGGATAATGTTTTGAAGAATCTGCTTATGTTGATTGGGTTTCTTGTCCTTCTTACGGTTATTTTTGTGTGGTAA 1695 0.5027 MAFRKTLAQRLLNITKVSSQALTNCRISSSSVIGRLSPRADEPVDPGENGLFRAPQLAGNLLDRLRTMGIAHNRIRLDGLTPPPPMEMVDTVTVKDARKLLKVAQVEMVKAKLRETRKSCITFSEFIGICDEHCSDQDQAVEIAKMLDNSAAVIVLGDVVFLRPEQVAKAIQGLLPVPGAKAHESVRREFEVMEKKKSAIDKKADTMVRRELWGGLGFMMVQTMAFMRLTFWELSWDVMEPICFYLTSMYCMAGYTFFLRTSKEPSFEGFYQVRLLALPPPCLQSLIPPLLSHLTILPFINDIEEYSTLLSPSANLGLQSPPPIHPLNDLSLSYKIQEGANILREEPGNFHEVFGENQIWGFASQDLPFPIKILLPSPTNSFSQPIYLSEGWLHHHSHSQECPVCKALVQEEKLVPLYGRGKTQTDPRTKSYPGMEIPHRPSGQRPQTAPPPPPPEANPFGSYGFGLMGGFIPMATARFGNFTLSTAFGGFIPSLLNIHFHGFQDATVYGTTSGYPFGFNGFHGGNTRGFTQATGQVQRQEDNVLKNLLMLIGFLVLLTVIFVW 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01818 564 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 1 275 - -
Gma01g01818 564 Coils Coil 94 114 - -
Gma01g01818 564 MobiDBLite consensus disorder prediction 419 459 - -
Gma01g01818 564 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 275 IPR039055 GO:0051560
Gma01g01818 564 MobiDBLite consensus disorder prediction 444 459 - -
Gma01g01818 564 Pfam Mitochondrial calcium uniporter 137 276 IPR006769 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01818 Gma-Chr1 53771257 53778192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01818 392 562 C3H Transcription Factor Family AT2G23780 60.000 2.42e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01818 K20858 - gmx:100814253 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01818 01 53771257 53778192 Gma01g01818 01 53771257 53778192 ECH
Gma11g00583 11 4885816 4888448 Gma01g01818 01 53771257 53778192 ECH
Gma01g01818 01 53771257 53778192 Gma11g00581 11 4876975 4878798 GST