Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01808 ATGGAAACAGTACGTTGTCTGGCATGCGTACTTGTTGAAGAAAGCACAGCTAAAGTTTCTAAACCATCTTCTACTTCTTCTACTAAGATACCACTGGCACCTTCATATCCTGATTGGTCAAGCTCGGTGCAGGCTTACTATGCTCCTGGAGTCACACCACGTGCATTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCTTATTTGTGGGGAAGCCAGCAGCCTCTAATTCCACCATATGGTACTCCTGTTCCATATCCAGCTATATATCCTCCTGGGAATGTCTATGCTCATCCAAGCATGGCAACGACCCCAAGCACCACACAGAATGGTACAGAGTTATTAGGAAAGGAGTCTGATGGAAAAGATCGGGTTTCTGCCAAAAGTTCGAAGGGTGTGTCTACAAACAGTGGTTCCAAAGCAGGAGACAATGGAAAGGCAGGCTCAGGTTCTGGAAATGATGGTGTCTCACAAAGTGCTGAAAGTGGTTCAGAGGGATCTTCAGATGCTAGTGATGAGAATACTGACCAACAGGAATCAGCTACAAACAAGAAAGGGAGTTTTGACCAAATGCTTGTTGATGGAGCCAATGCACGGAAGAATTCTGTGAGCACCATTCCTCATTCTTCAGTACCTGGAAATCCCGCTGTCTCAATGTCTCCAACTAGTCTTAATATTGGAATGGACTTGTGGGACGCATCTCCTGCTGGTGCCGAAGCTGCAAAAATGAGACATAATCAGTCTTCTGCCTCAGAAGCTGTTACTCCTCCAACCATAATGGGACGTGAAGTCCCGCTTGGTGAACAATGGATACAAGACGATCGTGAACTAAAGAAACAGAAAAGGAAACAGTCTAATAGGGAGTCTGCTAGGAGGTCAAGGCTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAGTCTCTGAGAAGTGAGAATCGAATTCTCAGAGAAGAGCTTCAGAGAGTATCTGAAGAATGCAAGAAACTTACATCTGAAAATGATTCCATCAAGGAAGAGTTAGAACGAATGTGTGGTTCAGAAGCAATTGCTAATCTTGAATGA 1074 0.4507 METVRCLACVLVEESTAKVSKPSSTSSTKIPLAPSYPDWSSSVQAYYAPGVTPRAFFASTVASPTPHPYLWGSQQPLIPPYGTPVPYPAIYPPGNVYAHPSMATTPSTTQNGTELLGKESDGKDRVSAKSSKGVSTNSGSKAGDNGKAGSGSGNDGVSQSAESGSEGSSDASDENTDQQESATNKKGSFDQMLVDGANARKNSVSTIPHSSVPGNPAVSMSPTSLNIGMDLWDASPAGAEAAKMRHNQSSASEAVTPPTIMGREVPLGEQWIQDDRELKKQKRKQSNRESARRSRLRKQAECEELQKRVESLRSENRILREELQRVSEECKKLTSENDSIKEELERMCGSEAIANLE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01808 357 SMART brlzneu 275 339 IPR004827 GO:0003700|GO:0006355
Gma01g01808 357 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 282 297 IPR004827 GO:0003700|GO:0006355
Gma01g01808 357 Pfam bZIP transcription factor 276 337 IPR004827 GO:0003700|GO:0006355
Gma01g01808 357 SUPERFAMILY Leucine zipper domain 278 334 IPR046347 GO:0003700|GO:0006355
Gma01g01808 357 Coils Coil 288 343 - -
Gma01g01808 357 MobiDBLite consensus disorder prediction 129 188 - -
Gma01g01808 357 CDD bZIP_plant_GBF1 280 330 IPR045314 GO:0003700|GO:0006355
Gma01g01808 357 PANTHER G-BOX-BINDING FACTOR 1 13 357 - -
Gma01g01808 357 MobiDBLite consensus disorder prediction 101 116 - -
Gma01g01808 357 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 277 340 IPR004827 GO:0003700|GO:0006355
Gma01g01808 357 MobiDBLite consensus disorder prediction 269 284 - -
Gma01g01808 357 MobiDBLite consensus disorder prediction 198 228 - -
Gma01g01808 357 PANTHER G-BOX-BINDING FACTOR 3-RELATED 13 357 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gma01g01808 357 MobiDBLite consensus disorder prediction 101 304 - -
Gma01g01808 357 Gene3D - 278 332 - -
Gma01g01808 357 Pfam G-box binding protein MFMR 14 102 IPR012900 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01808 Gma-Chr1 53681457 53688536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01808 18 357 bZIP Transcription Factor Family AT4G36730 51.471 9.70e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gma01g01808 MFMR 8.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01808 K09060 - gmx:100808533 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01808 01 53681457 53688536 Gma01g01808 01 53681457 53688536 ECH
Gma11g00596 11 4995594 5000836 Gma01g01808 01 53681457 53688536 ECH