Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01806 ATGAGAGTTCCCGTTCCCTCATCCCCACAGGCCAACCCAAAACCCACCAATAACGTTGTCCGTACCATTGCCCTTCCCAACCTCAACAATAGCACCACGCCCCCCACGGGCCTGTGCTACGAGCCCACTTCTGTCCTTGACCTGTGCCGGAGCCCGAGCCCGGGCACCGAAAAGCCCACCACCGATCACTCCGTTCTCGTCACCAACTCCCAAGACTATCTCGACCTGGAAGACCATGCGTTGCACAACTTGGACTGGGACTCCATCATGAAGGACTTGGGCTTACACGACGACTCCGCCACCCCCGTTTTGAAAACTTTTCTCCACCCCGACGACGACGACGACGACGACAACAACAACAACCCATCATGCGACGACTTCACACTCTTCGACCACGCGCTTGAATTCACCACTCTCTCCGACATCTACTCCAACCAAAACTTCGCTTTCGATTTCAACCACTTGCCTCACGACTTCAACCACCTCAACGGCTTCGATTTCATCGAAGAGCTCATCCGCGCCGCCGACTGCTTCGACACCAAGCAGTTACACGTGGCGCAACTGATATTGGAGCGGCTCAATCAACGACTACGATCGCCCGTCGGAAAACCACTCCATCGCGCAGCGTTTTACCTCAAAGAAGCTCTCCAGAGTCTTCTCTCCGGTTCGAACCGGACTCCGAGGATTTCATCCCTGGTGGAAATCGTGCACAGTATCAGAACCTTCAAGGCCTTTTCGGGAATTTCGCCGATCCCAATGTTCTCGATCTTCACCACCAATCAAATAGTTCTGGATCACGCGGCGAGCTCCTTCATGCACGTCATCGACTTCGACATCGGTCTTGGGATCCAATACGCTTCCCTAATGAAGGAGATTGCGGAGAAGGCGGCGGATTCGCCGGTGCTCCGAATCACCGCCGTCGTTCCGGAAGAATACGCCGTCGAGAGCACGCTCGTCCGCGACAACCTCGCGCAGTTCGCCCTAGATCTCAGGATCCGCGTGCAGGTCGAGTTCGTGCCGCTTCGAACCTTCGAGAATCTCTCCTTCAAGGCCGTGAAGTTCGTCAACGGGGAGAACACCGCCGTGCTCCTGTCGCCGGCGATTTTTCGCCACCTCGGCAACGCCGCCGCGTTCCTGGCGGACGTGCGGAGGATCTCGCCGAGCGTGGTGGTTTTTGTGGACGGCGAGGGGTGGGCGGAGACTGCCACGGCGTCGGCGGCGTCGTTCCGGCGCGGCGTTGTGAGCAGTTTGGAGTACTACTCGATGATGCTGGAGTCGCTGGACGCGTCGACGGTGGGAGGCGGAGGGGAGTGGGTGAGGAGAATCGAGATGATGCAGCTGCGGCCGAAGATTTTGGCGGCGGTGGAGAGTGCGTGGCGGCGGGTTCCGCCGTGGAGGGAGGCGTTTTACGGCGCCGGAATGAGGCCGGTGCAGTTAAGCCAGTTTGCGGATTTTCAAGCAGAGTGCCTGTTAGCGAAGTCTCAAATCAGAGGATTTCACGTGGCAAAACGCCAGAACGAACTGGTGCTTTTCTGGCATGATAGGGCCATTGTTGCCACGTCAGCATGGCGCTGTTAG 1578 0.5786 MRVPVPSSPQANPKPTNNVVRTIALPNLNNSTTPPTGLCYEPTSVLDLCRSPSPGTEKPTTDHSVLVTNSQDYLDLEDHALHNLDWDSIMKDLGLHDDSATPVLKTFLHPDDDDDDDNNNNPSCDDFTLFDHALEFTTLSDIYSNQNFAFDFNHLPHDFNHLNGFDFIEELIRAADCFDTKQLHVAQLILERLNQRLRSPVGKPLHRAAFYLKEALQSLLSGSNRTPRISSLVEIVHSIRTFKAFSGISPIPMFSIFTTNQIVLDHAASSFMHVIDFDIGLGIQYASLMKEIAEKAADSPVLRITAVVPEEYAVESTLVRDNLAQFALDLRIRVQVEFVPLRTFENLSFKAVKFVNGENTAVLLSPAIFRHLGNAAAFLADVRRISPSVVVFVDGEGWAETATASAASFRRGVVSSLEYYSMMLESLDASTVGGGGEWVRRIEMMQLRPKILAAVESAWRRVPPWREAFYGAGMRPVQLSQFADFQAECLLAKSQIRGFHVAKRQNELVLFWHDRAIVATSAWRC 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01806 525 PANTHER SCARECROW-LIKE PROTEIN 15 6 524 - -
Gma01g01806 525 Pfam GRAS domain family 168 524 IPR005202 -
Gma01g01806 525 ProSiteProfiles GRAS family profile. 158 524 IPR005202 -
Gma01g01806 525 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 524 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01806 Gma-Chr1 53671240 53673178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01806 73 524 GRAS Transcription Factor Family AT4G36710 55.532 2.07e-165 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gma01g01806 GRAS 1.2e-80 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01806 - - gmx:100807470 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01806 01 53671240 53673178 Gma01g01806 01 53671240 53673178 ECH
Gma01g01806 01 53671240 53673178 Gma11g00598 11 5008427 5009977 GST
Gma01g01806 01 53671240 53673178 Gma16g01293 16 31536381 31538343 PCT
Gma01g01806 01 53671240 53673178 Gma02g00533 02 5297777 5299806 PCT
Gma16g01293 16 31536381 31538343 Gma01g01806 01 53671240 53673178 PCT
Gma02g00533 02 5297777 5299806 Gma01g01806 01 53671240 53673178 PCT