Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01790 ATGTCTGACTCACTCTTAACTTTCTATTCTCTTTCAGCCATTCTTGCTCTTCTCCCAATCTTCATCTTCATTCTCATCAAAAGAAAGCAAAGCAAACCCAGGCTCAACCTTCCCCCAGGTAACATGGGTTGGCCATTTCTTGGTGAAACCATTGGCTATTTGAAGCCTTATTCTGCCACCACAATAGGGGAATTCATGGAGCAACACATAGCAAGGTATGGTACAATTTACAAGTCAAAACTGTTTGGGGAGCCAGCAATAGTGTCAGCAGATGCAGGACTCAACAGGTTCATTCTACAAAACGAAGGGAAATTGTTCGAGTGCAGCTATCCTAGAAGCATCGGTGGAATACTAGGAAAATGGTCCATGTTGGTCTTAGTTGGTGACATGCATAGAGACATGCGGGTTATATCACTCAACTTTCTAAGCCACGCCAGGCTCAGAACACACCTCTTGAAAGAGGTGGAGAAGCAATCCCTCTTGGTTCTGAACTCTTGGAGCCAAAATTCCATATTCTCAGCCCAAGATGAAGCTAAGAAGTTCACCTTCAATTTAATGGCTAAGCATATCATGAGCATGGATCCTGGGGATATCGAGACAGAGCAACTAAAGAAAGAGTACGTCACTTTCATGAAAGGGGTGGTTTCCGCGCCATTGAATTTACCTGGAACTGCATACCGAAAGGCATTGAAGTCTCGGTCCATTATACTAAAGTTCATAGAGGGGAAAATGGAAGAGAGAGTTAGAAGAATCCAAGAGGGGAATGAGAGTTTGGAGGAAGATGATCTTCTAAACTGGGTTTTGAAGCATTCGAATCTTTCAACGGAGCAAATTCTTGACTTGATTCTCAGCTTGCTCTTCGCTGGCCATGAAACTTCGTCGGTAGCCATAGCTCTAGCCATTTATTTCTTACCCGGTTCTCCTCAAGCTATACAACAGTTAAGGGAAGAACACAGAGAAATTGCCAGAGCCAAAAAGCAAACAGGGGAAGTTGAACTCACTTGGGATGACTACAAACGAATGGAATTTACTCATTGTGTTGTGAACGAGACACTTAGGTTGGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTGTGAAAGATGTTAGCTATAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATGGTAGTCGTGGTGGAAGTTGTTCAAGCAAGAACACAGCAAACAACAACTTTCTTCCGTTCGGAGGAGGACCACGATTATGTGCAGGATCAGAGTTAGCTAAGCTTGAAATGGCTGTTTTCATTCACCATCTCATTCTCAACTACCATTGGGAATTGGCTGATACGGATCAAGCTTTTGCCTACCCTTTTGTCGACTTCCCCAAAGGCCTACCCATTAGAGTCCAAGCCCACTCTTTGCTTTGA 1473 0.4406 MSDSLLTFYSLSAILALLPIFIFILIKRKQSKPRLNLPPGNMGWPFLGETIGYLKPYSATTIGEFMEQHIARYGTIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVEKQSLLVLNSWSQNSIFSAQDEAKKFTFNLMAKHIMSMDPGDIETEQLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSIILKFIEGKMEERVRRIQEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGSPQAIQQLREEHREIARAKKQTGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKAVKDVSYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGSRGGSCSSKNTANNNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELADTDQAFAYPFVDFPKGLPIRVQAHSLL 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01790 490 Gene3D Cytochrome P450 26 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PANTHER BNAC01G23810D PROTEIN 66 486 - -
Gma01g01790 490 PANTHER CYTOCHROME P450 26 66 486 - -
Gma01g01790 490 SUPERFAMILY Cytochrome P450 34 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Gma01g01790 490 Coils Coil 241 261 - -
Gma01g01790 490 Pfam Cytochrome P450 38 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gma01g01790 490 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01790 Gma-Chr1 53518067 53523245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01790 27 421 Cytochrome P450 AT3G50660 74.760 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01790 K09587 - gmx:100802498 973.77