Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01784 ATGAATGAGGAGTGTACGGTCTTTTCATGCACATCCCTCCTCAACCTACTATTTGATTTTTCAAAGTGGGTTATTGATGCTTTTTGCTTGGGCGACAAGTTAAAATTTGCGAACCATTCATCAAAGCCCAACTGCTATGCAAAGGTGATGCTTGTTGGAGGAGATCATCGAGTCGACATATTTGCTAAGGAAAACATTGAAGTTGGGGATGAGATCTTTTTTGATTATTGCTATGATCTAGACTGCGCACCGCTATGA 258 0.407 MNEECTVFSCTSLLNLLFDFSKWVIDAFCLGDKLKFANHSSKPNCYAKVMLVGGDHRVDIFAKENIEVGDEIFFDYCYDLDCAPL 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01784 85 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 14 84 - -
Gma01g01784 85 Gene3D SET domain 2 79 IPR046341 -
Gma01g01784 85 Pfam SET domain 20 76 IPR001214 GO:0005515
Gma01g01784 85 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 14 84 IPR045318 GO:0006338|GO:0018024
Gma01g01784 85 SUPERFAMILY SET domain 14 80 IPR046341 -
Gma01g01784 85 ProSiteProfiles SET domain profile. 1 77 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01784 Gma-Chr1 53447377 53450579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01784 22 81 EF-hand Containing Proteins AT5G13960 35.938 3.68e-06 41.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma01g01784 SET 5.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01784 - - gmx:100788459 119.012