Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01761 ATGGATCAGTCATCACCTTATTATAACCGATTTCCTCAGACTCCAAGCTCAACCAAAAAGGGAAGAAGTGGTTATGAACCATCAGACACAGAGTCAGAGCGGCAAGAGATTCCACGGCATGAACGAGAAAGAAGAAACTTCACTTTAGAAGAAACAAAAGATTTTACTCTAATGAACAAAAGCCCCATGGCACTACACAGGAGGCACCCTTCAAGGTTTGAAAACGAAGTCTCATCAGCTTCAACAGCTTCAGCTCCACGAAGAAGACACCATAGTAAATCACCCTATAAGCTGCGCGTAGCAGAAGCAAATGTTGCTGTTGCTGTTGCTGGTGTTGCATCATCATCACCCATAATAGGTTTGAATACAAGGAGAAATATCAGTCCCTTGTCGAGACCTGACATTGGAAGAACCGTGTCTCCTTTCAGGGAGCAAAGAATTGAGAAGCCACACTACAAGAGATCAGTGACTGCTCCAAGATTGAGGATTCAAGAGAGCAACAACGGAGGGAGAACCAATGAAAAGGTTAATAGACAAAGAGAAGCTTCTCCTTTCAAAGCTCCTTCGGTTGGAGAAATCAACGAGATGATAGCACAGGTGAAGCTATCTCAAGATCCCACCAGTGATTATTCGTCAGTGCTTGAAAGCACTGATTCCATTCATCCGGGTGACCTTTTCTTTTCTCGCGAATGCAATGCCTTTCAAGCGAAGAATTCTTCGTTGCCAAGACGCATCGAACAACGTGAGCATTTCAGTCCAAGGCCACCGGTGAACACCACGAGAGTCCCATCCGAAAGAAAAGGAAAGAATGCTGACATTAAGATGAATATGAATATCTTGTCTCGATCAACCACGGTTTTAAGTACTTCGGCTACGAGCAGAAAGGGCAGTGGCACTGGGAAGCCAAGTAGTGTAACAAGCGAAGGTAGTGGAAAGACAACTGAAAGCATGAGGAAATTCACAGCCAACAGAAAAAAGAATCAGAAAGATACATGGTTTTCTTGCATGAGAACAGGTAACTGTAGAACCACTAGAAAATCGCCTGAACGTCGACCAATTGATGAATCTTCTTTCATAGAGAGGGCAGTGGTAGTCGAAAGCCTCCCACAATTCTGGGCAGATAAGCACCAACCTGCTTCACTTAATGGCTTCATTTGCAACAGACAAGAAGCTCAACTTCTCAAGGAATTGGTGTCTCAGGGCTCTTGTCCTCATATTTTGCTTCAAGGACCCTCTGGCTCTGGGAAAAGAGAACTAGCAATGGCTCTTCTTCGAGAAATATATGGGGATGCATGTTGTAACCTGTCTCATGATTTAAGACATTTCCCTATTCAGGACCAAAGGCTTAAGAAAGTATCTGTTCCAATAACATCCAGTTCTCATCACATGGAGCTCGATGTAAATTCAGAATCAAATGCTAAATATGCTTTAATGGGATTAATCAAAGAAATTAGCAATATATATGCAGTTGCCCCCGAAGTCAGCAATATTAATTTCAAGTCAGATTTTAAAGTTATAGTTCTTTATGACGTCCACAAAGCAGTAGATAATATCCGGCACATTATCAAATGGATCATAGACCGCTATTCGGATATTTGCAAATTAGTGCTCTGCTGTGAAGATGATGCAGACATTATTGAACATGTGAAAAATCGATTCAAAGTTATCCAAGTTGATGCTCCTCAAAATCACGAAattattgaggttcttattcagatagcaaagaatgaggaaattgatctatccatgaattttgctgcaaaaattgctacaaaatctaagcagaacctcagaaaagcaatcatggctcttgaagcatgcaaagcacacaactatccattttctgcagaacaaccaattccggttggatgggaggagattgtaatagaagttgccgcagagatcctagctgatccatcattttcacggcaagaaacttctttttctatcttatggaaatttcaaatgcttctcttggattttgtccacccgaaattgattctccagaaactcgtgggacatctcctaaaaagaattgaggtcagcttaagaagggagctttactactggcatgcttattatgacagaagactccccccaggaataactgctttactaaagttagaagAATTCGTGGCCAAGTTCATGAGCATGTGCAGAAAAAACTCTGGCAATCGGCAATATGTGTAG 2190 0.3384 MDQSSPYYNRFPQTPSSTKKGRSGYEPSDTESERQEIPRHERERRNFTLEETKDFTLMNKSPMALHRRHPSRFENEVSSASTASAPRRRHHSKSPYKLRVAEANVAVAVAGVASSSPIIGLNTRRNISPLSRPDIGRTVSPFREQRIEKPHYKRSVTAPRLRIQESNNGGRTNEKVNRQREASPFKAPSVGEINEMIAQVKLSQDPTSDYSSVLESTDSIHPGDLFFSRECNAFQAKNSSLPRRIEQREHFSPRPPVNTTRVPSERKGKNADIKMNMNILSRSTTVLSTSATSRKGSGTGKPSSVTSEGSGKTTESMRKFTANRKKNQKDTWFSCMRTGNCRTTRKSPERRPIDESSFIERAVVVESLPQFWADKHQPASLNGFICNRQEAQLLKELVSQGSCPHILLQGPSGSGKRELAMALLREIYGDACCNLSHDLRHFPIQDQRLKKVSVPITSSSHHMELDVNSESNAKYALMGLIKEISNIYAVAPEVSNINFKSDFKVIVLYDVHKAVDNIRHIIKWIIDRYSDICKLVLCCEDDADIIEHVKNRFKVIQVDAPQNHEIIEVLIQIAKNEEIDLSMNFAAKIATKSKQNLRKAIMALEACKAHNYPFSAEQPIPVGWEEIVIEVAAEILADPSFSRQETSFSILWKFQMLLLDFVHPKLILQKLVGHLLKRIEVSLRRELYYWHAYYDRRLPPGITALLKLEEFVAKFMSMCRKNSGNRQYV 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01761 729 CDD AAA 387 427 - -
Gma01g01761 729 Gene3D - 623 719 - -
Gma01g01761 729 MobiDBLite consensus disorder prediction 1 94 - -
Gma01g01761 729 Gene3D - 370 561 IPR027417 -
Gma01g01761 729 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 180 728 - -
Gma01g01761 729 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 370 609 IPR027417 -
Gma01g01761 729 MobiDBLite consensus disorder prediction 1 23 - -
Gma01g01761 729 MobiDBLite consensus disorder prediction 247 266 - -
Gma01g01761 729 Gene3D - 562 620 - -
Gma01g01761 729 MobiDBLite consensus disorder prediction 284 325 - -
Gma01g01761 729 MobiDBLite consensus disorder prediction 24 51 - -
Gma01g01761 729 MobiDBLite consensus disorder prediction 284 317 - -
Gma01g01761 729 MobiDBLite consensus disorder prediction 163 190 - -
Gma01g01761 729 SUPERFAMILY post-AAA+ oligomerization domain-like 623 718 IPR008921 GO:0003677|GO:0006260
Gma01g01761 729 PANTHER OS02G0704966 PROTEIN 180 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01761 Gma-Chr1 53265394 53269370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01761 371 718 Core DNA Replication Machinery Family AT5G27740 36.467 2.18e-71 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01761 K10756 - gmx:100817775 1327.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01761 01 53265394 53269370 Gma01g01761 01 53265394 53269370 ECH