Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01715 ATGGAGTCGATGGAGTCATGTATCCCACCAGGGTTTCGGTTCCACCCAACAGATGAAGAGCTTGTTGGTTATTACCTCAGGAAGAAAGTGGCTTCTCAGAAAATTGACCTTGATGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGAGAGATGCAGGATAGGGTATGACGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAAAAGTATCCAACAGGGACAAGAACTAATAGAGCCACCATGGCGGGGTTTTGGAAGGCAACAGGAAGAGACAAAGCAGTGTATGAAAGGGCAAAACTTATTGGGATGAGAAAGACCCTTGTTTTCTACAAAGGAAGAGCCCCAAATGGACAGAAAAGTGATTGGATCATGCACGAGTATAGGCTTGAATCTGATGAGAATGGACCCCCACAGGAAGAAGGATGGGTTGTGTGCAGAGCCTTCAAGAAGAAAACCACTGGGCAAACGAAGACTATTAATATTGAAGGATGGGACTCAAGCTACTTCTATGAAGAAGCAAGTGGGGCAAGCACTGTGGTCGATCCAATTGAACTCATTTCAAGGCAATCTCAGAGCTTTGTAGCTCAAAACTTCATGTGCAAGCAAGAGTTAGAAGCAGATAACTTGAGTTGCATGCTTCAAGATCCATTTGTGCAACTTCCTCAGCTAGAAAGCCCATCTTTGCCATTAGTAAAGAGGCCAAGCACAGTGTCACTAGTATCAGACAATAACGAAGATGAAGACATTCAAAACAGGTTGTTATCCAACAACAACAACACAAAGAAAGTCACCACTGATTGGAGAGCCCTTGACAAGTTTGTAGCCTCTCAACTGAGTCAAGAAGTAGACACGCATGAAAGTAATGGAGTACCCTCAAGCTTTCAACCCCATGATGATAACCACGACATGGCACTGCTGCTACTGCAGAGTAGTAGGGATGAGGGGAACAGGTTGAGCCCATTTCTAAATACAAGCTCAGACTGTGATATTGGGATATGCGTATTCGAAAAATGA 1035 0.4367 MESMESCIPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYDEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYERAKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLESDENGPPQEEGWVVCRAFKKKTTGQTKTINIEGWDSSYFYEEASGASTVVDPIELISRQSQSFVAQNFMCKQELEADNLSCMLQDPFVQLPQLESPSLPLVKRPSTVSLVSDNNEDEDIQNRLLSNNNNTKKVTTDWRALDKFVASQLSQEVDTHESNGVPSSFQPHDDNHDMALLLLQSSRDEGNRLSPFLNTSSDCDIGICVFEK 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01715 344 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 324 - -
Gma01g01715 344 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Gma01g01715 344 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 324 - -
Gma01g01715 344 SUPERFAMILY NAC domain 5 157 IPR036093 GO:0003677|GO:0006355
Gma01g01715 344 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Gma01g01715 344 Gene3D NAC domain 17 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01715 Gma-Chr1 52823240 52828185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01715 1 343 NAC Transcription Factor Family AT2G18060 64.151 6.27e-163 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gma01g01715 NAM 5.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01715 - - gmx:100778767 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01715 01 52823240 52828185 Gma01g01715 01 52823240 52828185 ECH