Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01714 ATGATTAAGGAGGCTTTGATCGCTTTGAACGAGAAAGGAGGATCGAGTCCTTATGCGATAGCGAAGTACATGGAGGAGAAGCACAAGGCGGTGCTCCCTGCGAATTTCAAGAAGATTCTAGGTCTGCAACTAAAGAACCAAGCTGCGAGAGGGAAACTCGTGAAGATCAAGGCTTCGTACAAGTTAACCGAAGCCGCGAAGAAGGAGAACACCGCCAAAGTGACGAAGGCCAACGCTGAGAAAAAGGAATCGCGTCCAAAACGAAGCAAAACCGCAACCGCCGCTGCTCCGAAGAAAACCGAGGCGGTTAAAAGGGCAGCGAAGAAGGTAGGGCCGAAGAAGACGAAGAAAGTGTCGACGCCTGCGAAGCCCAAGCAGCCCAAGTCCATTAGGTCTCCAACCAAGAGGGCCCGGAAAGCAGCCGTTGCTGCGGCTTGA 438 0.5274 MIKEALIALNEKGGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNQAARGKLVKIKASYKLTEAAKKENTAKVTKANAEKKESRPKRSKTATAAAPKKTEAVKRAAKKVGPKKTKKVSTPAKPKQPKSIRSPTKRARKAAVAAA 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01714 145 CDD H15 1 73 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma01g01714 145 PRINTS Histone H5 signature 86 100 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Gma01g01714 145 PRINTS Histone H5 signature 116 133 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Gma01g01714 145 PRINTS Histone H5 signature 8 25 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Gma01g01714 145 PANTHER HISTONE H1 1 141 - -
Gma01g01714 145 Pfam linker histone H1 and H5 family 1 59 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma01g01714 145 MobiDBLite consensus disorder prediction 67 145 - -
Gma01g01714 145 Gene3D - 1 73 IPR036388 -
Gma01g01714 145 PANTHER HISTONE H1 1 141 - -
Gma01g01714 145 SMART h15plus2 1 59 IPR005818 GO:0000786|GO:0003677|GO:0006334
Gma01g01714 145 MobiDBLite consensus disorder prediction 67 89 - -
Gma01g01714 145 SUPERFAMILY "Winged helix" DNA-binding domain 1 74 IPR036390 -
Gma01g01714 145 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 1 64 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01714 Gma-Chr1 52817569 52818718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01714 1 62 Single Myb Histone (SMH) Gene Family AT1G49950 38.710 5.19e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01714 K11275 - gmx:100500169 220.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01714 01 52817569 52818718 Gma01g01714 01 52817569 52818718 ECH