Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01711 ATGAGAGTGCTTGAAGAAGTTTATCCTCGTATTTCTGCCATTCCTGATGGACCTTCAGTTTCTTCTAACGTGGAGAATGAATGTTATGATGATAATGAGAGCGTCATTCCTCTCCTCCCTCTCATTCCTGTTGAGGAGGAACAAGAGTCAGTAGAGGATACTGAACCTGACTTTCCCACCAAAAAATTGCAGTCACAAAACTTGCAGCAGCAATATATACCACCAGCAACATCTCTCATTAACCCACAATGCAACAATATTAATTCACGTTGCAGTGGAAAACCACTACCTGCAACATCTTCTGAGTCAGATATAGTTGCAGCAGCTTCTGCTGCTGCTGTAGCTGCCATTATAAAAAGCAATGAGCAAGGAAGCTTGATTGATATGGATTTGCTCCGTAAATTATTTACTGACCCAACAATGATTGAAAAGTTAATTGAGCAAAATAGAACTGCTACCACCACTGTCAGTGCACCCTCAAATATTTTGAGTATACCAACTTCTTATTCTAAACCTGCAGCTGTAGCTTCTGAGACTAAACCAACTGCACCAACAACCACAATGGGTTTATGGCCTACTTCTGTGACAAGGAAAGCAACACATGAAAAGCCATCAATTACATCTGTTCCATCTGTTTCTTTGGCTATGCCTTTAACTCCTCAAACAGTAACAAGGCATAAACCTCAATCAACTCACAGGCCTGTCAAGAAAAATATTCCTCATATGCCAAATGGAGTGCTTCCCTCTTTAAACACTCACTCTCCACAACAAGGGTTAAAGAGAGCAGCACCATTGGCTTCTGTTTCCTCCAGTGAATTTAAAACAGTGGCAGTGCCTTCTGTTTCTGCAAACATGCATTCAGTTGCAAAACAGATGAAGTCCACCACAAGTGGTGCCGTCAAAGATGTCAACTATTACAGAAGCCTGGTTAAAGAACATGGTACTCATAAGCAAGGCAAGAAGAGTCTTAGGAATTTACAAGGTTTGAAACGATCGCAGGGGGAAGTGAAATTCAAAAGCAAGAAACCTTGCATATACTTCGGAACTCCAAGGGGTTGCCGTAATGGTTCTGATTGCCCTTTTCAGCATGATATGCCAAATCAGTGGGAAGCTGGTAACGTCCTAATGGCTCAAAATGCTAAAAGATTGAAAGTAGGAAGAGAAATTTAG 1170 0.4128 MRVLEEVYPRISAIPDGPSVSSNVENECYDDNESVIPLLPLIPVEEEQESVEDTEPDFPTKKLQSQNLQQQYIPPATSLINPQCNNINSRCSGKPLPATSSESDIVAAASAAAVAAIIKSNEQGSLIDMDLLRKLFTDPTMIEKLIEQNRTATTTVSAPSNILSIPTSYSKPAAVASETKPTAPTTTMGLWPTSVTRKATHEKPSITSVPSVSLAMPLTPQTVTRHKPQSTHRPVKKNIPHMPNGVLPSLNTHSPQQGLKRAAPLASVSSSEFKTVAVPSVSANMHSVAKQMKSTTSGAVKDVNYYRSLVKEHGTHKQGKKSLRNLQGLKRSQGEVKFKSKKPCIYFGTPRGCRNGSDCPFQHDMPNQWEAGNVLMAQNAKRLKVGREI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01711 389 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 385 - -
Gma01g01711 389 SUPERFAMILY CCCH zinc finger 343 365 IPR036855 GO:0046872
Gma01g01711 389 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 385 - -
Gma01g01711 389 ProSiteProfiles Zinc finger C3H1-type profile. 338 366 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01711 Gma-Chr1 52798453 52799732 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Gma01g01711 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01711 - - gmx:102665542 749.969