Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01708 ATGACTCTGGTTCTCTTTTCCACTATACTAACTCATGATAAATACCCCCCCTCCCCTCTACCCCATAATCCACACTTCCCAAACCCTCTACTAAAACATTCAAAGTTTAGTTTGAACAAGGTGCATCAGGAGAGCAAAATAATGGCCATAAAAAAATCCAATAAACTACCACAAGCTGTTGTTCTCAAGCAAATTGTCAAGAGATGCTCAAGTTTTGGCAAGAAGCAGACCTACAATGAAGAGGGTCTTCCCGATGATGTGCCAAAAGGCCATTTTGCGGTATATGTTGGGGATAACAGGACCAGATATATTATCCCAATTTCATGGCTGGCTCAGCCCCAGTTCCAAAGTCTGCTTCAAAGAGCTGAGGAGGAGTTTGGCTTCACCCATGACATGGGACTTACCATACCCTGTGATGAAGTTGCTTTTGAGTCCTTAACCTCCATGATGAGATAA 456 0.4298 MTLVLFSTILTHDKYPPSPLPHNPHFPNPLLKHSKFSLNKVHQESKIMAIKKSNKLPQAVVLKQIVKRCSSFGKKQTYNEEGLPDDVPKGHFAVYVGDNRTRYIIPISWLAQPQFQSLLQRAEEEFGFTHDMGLTIPCDEVAFESLTSMMR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01708 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 41 151 IPR003676 GO:0009733
Gma01g01708 151 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 41 151 - -
Gma01g01708 151 Pfam Auxin responsive protein 73 150 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01708 Gma-Chr1 52780983 52781965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01708 50 150 Calmodulin-binding Proteins AT4G34750 38.614 4.11e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01708 K14488 - gmx:100776099 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00693 11 5790793 5791361 Gma01g01708 01 52780983 52781965 ECH
Gma04g00238 04 2056145 2056770 Gma01g01708 01 52780983 52781965 ECH
Gma16g01211 16 29808105 29808544 Gma01g01708 01 52780983 52781965 ECH
Gma01g01708 01 52780983 52781965 Gma01g01708 01 52780983 52781965 ECH