Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01706 ATGGAACCTCAACAACAACAACAACAAGCACAAGGGAGCCAACAACAACAACAAAACGAGGATGGTGGCAGTGGAAAAGGGGGGTTTCTGAGCAGGCAAAGTAGTACACGGTGGACTCCAACAAACGACCAGATAAGAATATTGAAGGAACTTTACTACAACAATGGAATTAGATCCCCGAGTGCAGAGCAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAGAACCACAAAGCTCGAGAAAGGCAGAAGAAAAGGTTCACTTCTGATCATAATCATAATAATGTCCCCATGCAAAGACCCCCAACTAATCCTTCTGCTGCTTGGAAACCTGATCTAGCTGATCCCATTCACACCACCAAGTATTGTAACATCTCTTCTACTGCAGGGATCTCTTCGGCATCATCTTCTGTTGAGATGGTTACTGTGGGACAGATGGGGAATTATGGGTATGGTTCTGTGCCCATGGAGAAAAGTTTTAGGGACTGCTCGATATCAGCTGGGGGTAGCAGTGGCCATGTTGGATTAATAAACCACAACTTGGGGTGGGTTGGTGTGGACCCATATAATTCCTCAACCTATGCCAACTTCTTTGACAAAATAAGGCCAAGTGATCAAGAAACCCTTGAAGAAGAAGCAGAGAACATTGGTGCTACTAAGATTGAAACCCTCCCTTTATTCCCTATGCACGGTGAGGACATCCATGGCTATTGCAACCTCAAGTCTAATTCGTATAACTATGATGGAAACGGCTGGTATCATACTGAAGAAGGGTTCAAGAATGCTTCTCGTGCTTCCTTGGAGCTCAGTCTCAACTCCTACACTCGCAGGTCTCCAGATTATGCTTAA 888 0.4493 MEPQQQQQQAQGSQQQQQNEDGGSGKGGFLSRQSSTRWTPTNDQIRILKELYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDHNHNNVPMQRPPTNPSAAWKPDLADPIHTTKYCNISSTAGISSASSSVEMVTVGQMGNYGYGSVPMEKSFRDCSISAGGSSGHVGLINHNLGWVGVDPYNSSTYANFFDKIRPSDQETLEEEAENIGATKIETLPLFPMHGEDIHGYCNLKSNSYNYDGNGWYHTEEGFKNASRASLELSLNSYTRRSPDYA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01706 295 Pfam Homeodomain 35 96 IPR001356 GO:0003677
Gma01g01706 295 MobiDBLite consensus disorder prediction 1 41 - -
Gma01g01706 295 Gene3D - 30 96 - -
Gma01g01706 295 SUPERFAMILY Homeodomain-like 29 102 IPR009057 -
Gma01g01706 295 PANTHER PROTEIN WUSCHEL 1 288 - -
Gma01g01706 295 SMART HOX_1 33 101 IPR001356 GO:0003677
Gma01g01706 295 CDD homeodomain 36 98 IPR001356 GO:0003677
Gma01g01706 295 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 288 IPR044555 GO:0003700|GO:0099402
Gma01g01706 295 ProSiteProfiles 'Homeobox' domain profile. 31 97 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01706 Gma-Chr1 52754795 52756373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01706 29 246 Wox Gene Family AT2G17950 44.800 2.31e-53 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gma01g01706 Homeodomain 8.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01706 - - gmx:100775555 577.015