Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01696 ATGGGTGACATAGTGAAGCAAATATTGGCGAAGCCGATCCAGCTGGCGGACCAAGTAACCAAAGCCGCCGACGAGGCCAGCTCCTTCAAGCAGGAATGCGGCGACCTCAAGTCCAAGACGGAGAAGCTGGCGGCGCTGCTCCGTCAGGCGGCGCGTGCGAGTTCCGAACTCTACGAGCGTCCCACGCGCCGCATCATCGACGAAACCGAACAAGTCCTCGACAAGGCCCTCGCCCTGGTCCTGAGGTGCCGCGGCAACGCCCTCATGAAGCGCGTCTTCACGCTCAACCCGGGAGCCGCGTTCCGCAAGGTCTCCTTGCTCCTCGAGAACTCCACCGGCGACGTCTCCTGGCTCCTCCGCGTCTCCGCCGGCGACGGAGGCGGCGACTACATCGGCGGGCTCCCTCCTATCGCGGCGAACGACCCGATCCTCTGCCTCATCTGGGAGCAGATCGCCGTCCTCCACACGGGCTCGGCGGAGGACCGGTCCGACGCGGCCGCGCAGCTGGTCTCGCTGGCCAGCAGCAGCGACCGCTACGGGAAGCTGATAATCGAAGAAGGCGGGGTGGGCCCACTTCTGAAGCTTCTGAAGGAAGGAAAACCCGAAGGGCAGGAACACGCGGCACGTGCCATCGGGGTTCTGGGGCGTGACCCCGAGAGCGTTGAGCACGTGATCCACGTGGGCGCGTGCTCCGTCTTTGCGAAGATCCTCAAAGAAGGTCCTATGAAAGTGCAAGCTGTCGTGGCCTGGGCCGTGTCGGAACTCGCCGCCAATTACCCCAAGTGTCAGGACCTTTTCGCCCAGCACAACATCATAAGGCTACTCGTCGGTCACCTCGCTTTCGAAACCGTCGAGGAGCACAGTAAGTACACCATTGTCAGCACCAAACCCACTTCCATCCACGCCCTCGTCATCGCCAGCACCAATAACGTCAAGATGGAAGATCCATTTCTCGACAACCAAAACAAAGCACGAATGCCACATCCCTTGGGTGAAAGACCACGAAATCTCCATAGAGTAATCACTAGCACAATCGCAATGCACGCTGCCACCAAACACGGAAACGAATCAAATCCCAAGACCAATGGAGTTGGTAATGATGCCAAGCAAGGAAATCAGGATCAGAATCAGAATCACCAGCCAAACTATTCACATTCGGGGATAAACATGAAAGGAAGGGATCATGAGGATCCTAAGACTAAGGCTAACATGAAGGAAATGGCAGCGAGGGCTCTCTGGCAATTAGCGAAAGGAAACTCGCCAATTTGTCGTAGCATTACTGAATCAAGAGCACTGCTCTGTTTCGCTGTTCTTCTTGAAAAAGGAACGGAGGCTGTGCAGTACAATTCGGCTATGGCGGTGATGGAGATTACAGCAGTGGCAGAGAAAGATGCTGAATTAAGGAAATCCGCGTTTAAGCCCAACTCTCCTGCTTGCAAAGCCGTTGTTGATCAAGTGGTGAAGATAATAGAGAAAGCGGATTCGGAGCTTTTGATTCCGTGCATAAAGACGATTGGGAATCTGGCGAGGACCTTCAAGGCGACGGAGACAAGGATGATAGGGCCATTGGTGAAGCTTCTTGACGAAAGGGAAGCGGAGGTGTCAAGGGAAGCGTCGATTGCGCTCACGAAATTCGCGTGCACGGAGAACTACCTTCACGTGGATCACTCCAAGGCGATTATAATCGCCGGCGGGGCCAAGCACTTGATTCAGCTGGTGTATTTTGGAGGGGAAGAGATGGTTCAGATTCCAGCGCTGGTTCTGCTCTCCTACATTGCAATGCACGTCCCTGATAGCGAGGAACTTGCTCAGGCTGAGGTGCTTGGAGTCATTGAATGGGCCTCCAAGCAATCCTCCATTGCTAATGACCAAGCAATCGAGGCCTTGTTGTTGGAGTCCAAGACCAAGTTGGACCTTTACCAGTCTAGAGGTCCTAGAGGATTCCATAAATTGCATTTGCATCAGTTCGAATTCAGCAATACTCACTACCACCAACAAGTGCAGCTAGCTACAAAGTTTGGCCAACCATTTCCATTTGGCGCTGGAACCTCGCATATCTCCAACACGGGCTTCGCGCTACAACCAGGAGAATCCAACGTCGCCGGCAAGTTCACCTGCGTCACTAGTGACTGTGGTTCCTCAACCTGGAATGCGCCGGTGGCAATGGTTCTGCTCTTGCGCTCGCGTCTATGGTTATGA 2199 0.5484 MGDIVKQILAKPIQLADQVTKAADEASSFKQECGDLKSKTEKLAALLRQAARASSELYERPTRRIIDETEQVLDKALALVLRCRGNALMKRVFTLNPGAAFRKVSLLLENSTGDVSWLLRVSAGDGGGDYIGGLPPIAANDPILCLIWEQIAVLHTGSAEDRSDAAAQLVSLASSSDRYGKLIIEEGGVGPLLKLLKEGKPEGQEHAARAIGVLGRDPESVEHVIHVGACSVFAKILKEGPMKVQAVVAWAVSELAANYPKCQDLFAQHNIIRLLVGHLAFETVEEHSKYTIVSTKPTSIHALVIASTNNVKMEDPFLDNQNKARMPHPLGERPRNLHRVITSTIAMHAATKHGNESNPKTNGVGNDAKQGNQDQNQNHQPNYSHSGINMKGRDHEDPKTKANMKEMAARALWQLAKGNSPICRSITESRALLCFAVLLEKGTEAVQYNSAMAVMEITAVAEKDAELRKSAFKPNSPACKAVVDQVVKIIEKADSELLIPCIKTIGNLARTFKATETRMIGPLVKLLDEREAEVSREASIALTKFACTENYLHVDHSKAIIIAGGAKHLIQLVYFGGEEMVQIPALVLLSYIAMHVPDSEELAQAEVLGVIEWASKQSSIANDQAIEALLLESKTKLDLYQSRGPRGFHKLHLHQFEFSNTHYHQQVQLATKFGQPFPFGAGTSHISNTGFALQPGESNVAGKFTCVTSDCGSSTWNAPVAMVLLLRSRLWL 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01696 732 Gene3D - 148 313 IPR011989 -
Gma01g01696 732 Gene3D - 394 472 IPR011989 -
Gma01g01696 732 Gene3D - 473 631 IPR011989 -
Gma01g01696 732 Pfam Armadillo/beta-catenin-like repeat 182 214 IPR000225 GO:0005515
Gma01g01696 732 Gene3D - 3 121 IPR036537 GO:0007166
Gma01g01696 732 SMART arm_5 419 459 IPR000225 GO:0005515
Gma01g01696 732 SMART arm_5 475 510 IPR000225 GO:0005515
Gma01g01696 732 SMART arm_5 553 594 IPR000225 GO:0005515
Gma01g01696 732 SMART arm_5 217 257 IPR000225 GO:0005515
Gma01g01696 732 SMART arm_5 175 216 IPR000225 GO:0005515
Gma01g01696 732 SUPERFAMILY ARM repeat 152 613 IPR016024 -
Gma01g01696 732 Coils Coil 36 56 - -
Gma01g01696 732 MobiDBLite consensus disorder prediction 350 398 - -
Gma01g01696 732 PANTHER ARMADILLO REPEAT ONLY 2 1 649 - -
Gma01g01696 732 MobiDBLite consensus disorder prediction 350 387 - -
Gma01g01696 732 PANTHER ARMADILLO REPEAT ONLY 4 1 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01696 Gma-Chr1 52620689 52624819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01696 91 276 U-box Gene Family AT2G23140 28.497 8.73e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01696 01 52620689 52624819 Gma01g01696 01 52620689 52624819 ECH