Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01690 ATGGCTGTTACTGTGGCCATGTTACCTCGTTGGTCGGTGTTTCTTCTTTTTCTGTTTGTCTTGTGTAGCTCAGGAGCAAAGGTTGTCGCCATTGATGTACATGCAGCAAAGCGTCTCATCCAGACCGGTTCCATTTATCTTGATGTTAGGACGGTGGAAGAGTTCAAGAAAGGGCATGTGGATGCAGTTAATGTCCTTAACATTCCATACATGTTGAATACACCCAAGGGCAAGGTAAAGAATCCAGACTTTCTGAAGGAGGTTTCATCAGCTTGCAACAAAGAAGATCATCTCATTTTGGGTTGTCAAAGTGGGGTGAGATCTCTGTATGCAACTGCTGATCTTCTGTCTGAAGGTTTTAAGAATGTGAAAGACATGGGAGGAGGTTATGTGGACTGGGTTAAAAACAAGTTTCCAGTGATTATACCAGTGGCCAAAGAGGAACTATAA 450 0.4311 MAVTVAMLPRWSVFLLFLFVLCSSGAKVVAIDVHAAKRLIQTGSIYLDVRTVEEFKKGHVDAVNVLNIPYMLNTPKGKVKNPDFLKEVSSACNKEDHLILGCQSGVRSLYATADLLSEGFKNVKDMGGGYVDWVKNKFPVIIPVAKEEL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01690 149 SMART rhod_4 31 139 IPR001763 -
Gma01g01690 149 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 27 140 IPR036873 -
Gma01g01690 149 ProSiteProfiles Rhodanese domain profile. 45 142 IPR001763 -
Gma01g01690 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 14 147 - -
Gma01g01690 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 14 147 IPR044684 GO:0003824
Gma01g01690 149 CDD RHOD 35 134 - -
Gma01g01690 149 Pfam Rhodanese-like domain 36 135 IPR001763 -
Gma01g01690 149 Gene3D - 21 140 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01690 Gma-Chr1 52553773 52555642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01690 27 140 Sulfurtransferasese or Rhodanese AT5G66170 54.386 3.38e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01690 - K15692 gmx:100815122 286.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01690 01 52553773 52555642 Gma01g01690 01 52553773 52555642 ECH
Gma01g01690 01 52553773 52555642 Gma11g00708 11 5960094 5961607 GST
Gma01g01690 01 52553773 52555642 Gma16g01182 16 29331446 29340974 PCT
Gma01g01690 01 52553773 52555642 Gma02g00428 02 4365621 4367617 PCT
Gma16g01182 16 29331446 29340974 Gma01g01690 01 52553773 52555642 PCT
Gma02g00428 02 4365621 4367617 Gma01g01690 01 52553773 52555642 PCT