Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01655 ATGGTGATCGAGCATGACATTGAGAGTTGCGGGAGCAGAGCGATGCAATCTTTGCACGCGCATCACCCTCGCCACCACCGGCAGAAGCTGGAGGTGTACAATGAGGTGCTTCGGCGAATTCAGGAATCGGATTGCGAGGAGGGGCATGTTCCCGGCTTCGACGATCAGCTTTGGCTCCACTTCAATCGCCTTCCCGCTAGGTACGCGTTGGATGTGAATGTGGAGAGGGCAGAAGATGTTTTAGCTCATAAGAGATTGCTTAAGTTGGCAGAGGACCCTGCTTCTCGACCTGCATTTCAAGTTCGCTTAGTACAGGTAGTATATCCTTTTGGCGGTGCAAATTATGCTGATTCCATACATTTAGATCCTTCTGAGAAAGAAGATGCACAAAGTTCTCTTAACTATTCTTTAAAGCAGGGAATTCATCCACCACCTACATTTGGTTCATCCTCTAACCTTGAAGCTCTTGCACTTCAGAAAAACAAAAATAACATTGAAGATGGGGGAAGTGCTATGAGTGTAACACCATATTTCCGGCCCATGCACGAGATTACCTTTTCAACAGTTGACAAGCCTAAACTCCTTAGTCAGTTAACAGCAATACTTGGTGAGATGGGACTGAATATTCAAGAAGCTCATGCATTTTCCACTACTGATGGATTTTCTCTGGATGTCTTTGTTGTTGAGGGATGGCCTAATGAGGAAACTGAGGAGCTGAAAGGTGTGTTGGAAAAGGAAATTTTCAAGGTTAAGGAGCAAAATATGTCAAATCAGGGCATACATTATGCTACCAATGAACAATACCAGGCAAGGATGGAACCCTCCCCTCATTGCATTCAAATACCATCTGATGGAGCTGATGTCTGGGAGATTGATACCAACCAGCTGAAATATGAAAACAAAGTTGGCTCTGGGTCATTTGGTGACTTGTACAGAGGTACATATTGTAGTCAAGATGTGGCTATCAAAGTTCTTAAGCCTGAGCGCATAAGTACAGATATGCTGAGGGAGTTTGCACAGGAAGTTTATATCATGAGGAAGATTCGACACAAGAATGTTGTTCAGTTCATTGGCGCATGTACTAGGCCCCCAAATCTTTGTATTGTTACTGAGTTTATGTCTAGGGGAAGCTTATATGACTTTCTGCACAAACAAAGAGGTGTATTTAAGCTTCCATCTTTGCTAAAAGTAGCAATTGATGTTTCCAAGGGAATGAACTATTTGCACCAGAATAATATAATTCACCGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAAgtggtcaaggttgctgattttggggttgccagggtgcaaactcagtctggagtgatgacagctgaaactggaacataccgttggatggctcctgaggtcattgaacacaaaccatatgaccagaaggcagatgttttcagttttggaatagctctttgggagcttttaacTGGAGAACTGCCTTACTCTTGCCTGACCCCATTACAAGCAGCAGTTGGCGTGGTGCAGAAGGGCCTGCGGCCTACAATTCCCAAAAATACGCACCCAAGACTTTCTGAACTTCTTCAGCGGTGCTGGCAACAAGATCCAACGCAAAGACCAAATTTCTCTGAAATAATAGAAATTCTTCAGCAGATAGCAAAAGAGGTCAATGATCACAAAGATAAATCATCCCATGGCTTTCTCTCAGCTCTTAGACGGGCCCATCATTGA 1719 0.3944 MVIEHDIESCGSRAMQSLHAHHPRHHRQKLEVYNEVLRRIQESDCEEGHVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPASRPAFQVRLVQVVYPFGGANYADSIHLDPSEKEDAQSSLNYSLKQGIHPPPTFGSSSNLEALALQKNKNNIEDGGSAMSVTPYFRPMHEITFSTVDKPKLLSQLTAILGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPNEETEELKGVLEKEIFKVKEQNMSNQGIHYATNEQYQARMEPSPHCIQIPSDGADVWEIDTNQLKYENKVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLREFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDFLHKQRGVFKLPSLLKVAIDVSKGMNYLHQNNIIHRDLKTANLLMDENEVVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGIALWELLTGELPYSCLTPLQAAVGVVQKGLRPTIPKNTHPRLSELLQRCWQQDPTQRPNFSEIIEILQQIAKEVNDHKDKSSHGFLSALRRAHH 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01655 572 ProSiteProfiles Protein kinase domain profile. 296 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01655 572 ProSitePatterns Protein kinases ATP-binding region signature. 302 323 IPR017441 GO:0005524
Gma01g01655 572 Coils Coil 233 253 - -
Gma01g01655 572 CDD STKc_MAP3K-like 302 545 - -
Gma01g01655 572 Pfam Protein tyrosine and serine/threonine kinase 296 545 IPR001245 GO:0004672|GO:0006468
Gma01g01655 572 Gene3D Phosphorylase Kinase; domain 1 286 374 - -
Gma01g01655 572 Gene3D Transferase(Phosphotransferase) domain 1 375 567 - -
Gma01g01655 572 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 16 562 - -
Gma01g01655 572 PRINTS Tyrosine kinase catalytic domain signature 453 463 IPR001245 GO:0004672|GO:0006468
Gma01g01655 572 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Gma01g01655 572 PRINTS Tyrosine kinase catalytic domain signature 370 383 IPR001245 GO:0004672|GO:0006468
Gma01g01655 572 PRINTS Tyrosine kinase catalytic domain signature 407 425 IPR001245 GO:0004672|GO:0006468
Gma01g01655 572 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Gma01g01655 572 ProSiteProfiles ACT domain profile. 183 258 IPR002912 -
Gma01g01655 572 SUPERFAMILY ACT-like 181 246 IPR045865 -
Gma01g01655 572 SUPERFAMILY Protein kinase-like (PK-like) 273 545 IPR011009 -
Gma01g01655 572 SMART serkin_6 296 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01655 572 CDD ACT_TyrKc 181 247 - -
Gma01g01655 572 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 562 - -
Gma01g01655 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01655 Gma-Chr1 52233720 52242691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01655 8 571 MAP Kinase Kinase Kinase AT4G35780 70.702 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Gma01g01655 PK_Tyr_Ser-Thr 1.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01655 - - gmx:100803377 1154.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma16g01276 16 31258999 31260528 Gma01g01655 01 52233720 52242691 PCT
Gma02g00513 02 5123430 5124512 Gma01g01655 01 52233720 52242691 PCT