Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01654 ATGAAACTAATGACAGCAACAACAACGTTTGATGTCTCTGCCACATGCTTCCGTGCCCCTCCTCCTTCGTGCTCAATGAATCCATGCCACACCAGGTCAAATAATTTAACCATTCTTCTATACCATATTGCTCTTCTTTTTCTAAAACTTCAAAGTGTTGTTACGTGCAGTTTTTCAGTTATAAACTCCCTGAATCCTCACAAGGGACGACGGATAAGCGTTGCTGTTCCACCCAAGTTTCCAAACTTCCGGAGGGAAGCATCTCTGCAGGGGAATTTGGAGGCTATTAGAGTCCCAACTTCGGTGCCTGTGCGTGTAGCATACGAGCTTCTTCTAGCTGGTCATCGATATTTGGATGTAAGGACCCCGGAAGAGTTCGATGCTGGACACGCTCCTGGCGCAATTAACATTCCTTATATGTTCAGAGTTGGATCAGGGATGACAAAGAACAGCAACTTTATTAGAGAGGTGTCTTCACAGTTTAGGAAAGATGATGAAATTATTGTCGGGTGTGAGCTTGGTAAAAGATCTATGATGGCCGCAAGTGACTTGCTAGCTGCTGGGTTCACTGGACTCACAGACATGGCTGGTGGTTATGCTGCATGGACACAAAATGGACTTCCAACAGAGCTATGA 636 0.4528 MKLMTATTTFDVSATCFRAPPPSCSMNPCHTRSNNLTILLYHIALLFLKLQSVVTCSFSVINSLNPHKGRRISVAVPPKFPNFRREASLQGNLEAIRVPTSVPVRVAYELLLAGHRYLDVRTPEEFDAGHAPGAINIPYMFRVGSGMTKNSNFIREVSSQFRKDDEIIVGCELGKRSMMAASDLLAAGFTGLTDMAGGYAAWTQNGLPTEL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01654 211 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 97 209 IPR036873 -
Gma01g01654 211 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 210 - -
Gma01g01654 211 CDD RHOD 118 202 - -
Gma01g01654 211 Pfam Rhodanese-like domain 117 204 IPR001763 -
Gma01g01654 211 ProSiteProfiles Rhodanese domain profile. 111 211 IPR001763 -
Gma01g01654 211 SMART rhod_4 101 208 IPR001763 -
Gma01g01654 211 Gene3D - 87 210 IPR036873 -
Gma01g01654 211 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 1 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01654 Gma-Chr1 52223153 52225288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01654 101 208 Sulfurtransferasese or Rhodanese AT5G66170 45.455 7.38e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01654 - - gmx:100305968 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01654 01 52223153 52225288 Gma11g00708 11 5960094 5961607 GST
Gma01g01654 01 52223153 52225288 Gma16g01182 16 29331446 29340974 PCT
Gma01g01654 01 52223153 52225288 Gma02g00428 02 4365621 4367617 PCT