Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01645 ATGGCTTCCCTTGATGATCATAAAACTAATGAAGAAATTTCCATCAACCATGTTGAGATTCCTATCCATGCAATTGGTGTAGAGCCAAAACCAAACCAAGAGGTCAAAGAGAGAAGAAACATTGACTATTCTCAGAGAGCACAATGGCTTCGTGCAGCCGTATTAGGAGCCAATGATGGGTTAGTCTCAGTTGCATCATTGTTGATGGGTGTTGGAGCTGTTAAGGAAAACATCACGGCCATGCTTCTTGCTGGCTTTGCAGGGCTAATTGCTGGGGCATGTAGCATGGCAATTGGAGAATTTGTTTCTGTGTACACTCAATATGACATAGAAATTGCTCAAATTAAAAGAGATAAAGAAAATAATAATATTGGTGAAGAAGCACAAAGGGAGAAGTTGCCAAATCCATTTCAGGCTGCTCTAGCATCAGCACTAGCATTTTCTGTGGGTGCAGTGATACCACTACTAGCAGCTGCATTCATAAGGAACTATAAGATTAGGCTTGTTGTCGTTGCTGTTGTAGCTAGCCTGACATTGTTGCTATTTGGTGGTGTTGGAGCAGTGCTTGGAAAAACTCCAGTGAGGAAGTCCTGTATCAGAGTGCTCCTTGGAGGTTGGATGGCCATGACTATAACTTTTGGTCACCAAGTTATTTGGCATTGCTGGGCTTTCAATGTGATTCATTACTTTGGTCTTTTTTAA 702 0.4174 MASLDDHKTNEEISINHVEIPIHAIGVEPKPNQEVKERRNIDYSQRAQWLRAAVLGANDGLVSVASLLMGVGAVKENITAMLLAGFAGLIAGACSMAIGEFVSVYTQYDIEIAQIKRDKENNNIGEEAQREKLPNPFQAALASALAFSVGAVIPLLAAAFIRNYKIRLVVVAVVASLTLLLFGGVGAVLGKTPVRKSCIRVLLGGWMAMTITFGHQVIWHCWAFNVIHYFGLF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01645 233 Pfam VIT family 127 214 IPR008217 GO:0005384|GO:0030026
Gma01g01645 233 Pfam VIT family 50 126 IPR008217 GO:0005384|GO:0030026
Gma01g01645 233 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 216 IPR008217 GO:0005384|GO:0030026
Gma01g01645 233 PANTHER VACUOLAR IRON TRANSPORTER-LIKE PROTEIN 1 216 - -
Gma01g01645 233 CDD Nodulin-21 48 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01645 Gma-Chr1 52159716 52160417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01645 32 214 Nodulin-like Gene Family AT3G43660 63.934 5.78e-85 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01645 K22736 - gmx:100817158 352.058