Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01639 ATGGCTTGTCTGAGCCGCCACCACCACCACCACCGCTCCTGGCTCACTTCCCCCGACGACATGCTCCAACGCTGCCCCCTCTCCGCCCACCACCACCGTCTCCGCGATGATGACGCCGAGCCTATCTACCTTCCCTCTCTCTCCTCCGCCTACCGCATCTTCCCCGTCTACGCCATGGGCGCCCCCGACCCGATTTGGAAGGCCGTCAGGGACGAAGCCAAGCTCGAGGCAATTCCCTCCTTCATTCTTAGCTTCTTGTACGCTAGTATTTTGGCGCATGATTGCTTGGAGCAAGCATTGGCGTTTGTGGTGGCCAACCGTCTCCAAAACCCTACTCTCTTGGCCACTCAGCTTATGGATATCTTCTGTCTTGTCATTTTGCATGACAAAGCTATCCAGCGATCCATTCGCCTCGATGTTCAGGCATTAAAAGATCGTGACCCTGCTTGTTTGTCGTATTGCTCCGCGCTTTTGTATACGAAGGGTTATCATGCTCTGCAAGTACATCGGGTAGCTCATGCATTGTGGCACCAGGGACGCAAAGTCTTGGCCCTGGCTTTGCAAAGCCGTGTTAGTGAGGTAGTTTTTGGAGTGGACATTCATCCAGCTGCGAAAATTGGGGAGGGGATTTTATTAGATCATGGGACAGGTGTGGTTATTGGTGAAACTGCTATTGTTGGAAACAGAGTTTCACTGATGCATGGCGTAACATTAGGAGGCACGGGGAAGGAAATAGGTGATCGTCATCCCAAAGTAGGTGAAGGGGCACTAATTGAAGCTAGTGCAACTATACTTGGGAATATAAAGATTGGTGAAGGTGCCATGATAGCTGCGGGTTCCCTGGTGTTAAAAGATGTCCCTCCCCACTGCATTGCAGCAGGAATACCAGCTAAAGTTATTAGTGCTCTACAGGAGCATGACCCATCTTTAACCATGAAGCATGATGCTAGTAAAGATCTTTTCACACATGTAGCTACTAATTTCATAGATGAAAAGCCCAATGGAGCTCAGAATCCCGATAGAAATGAAGTTAACAATTGA 1041 0.4986 MACLSRHHHHHRSWLTSPDDMLQRCPLSAHHHRLRDDDAEPIYLPSLSSAYRIFPVYAMGAPDPIWKAVRDEAKLEAIPSFILSFLYASILAHDCLEQALAFVVANRLQNPTLLATQLMDIFCLVILHDKAIQRSIRLDVQALKDRDPACLSYCSALLYTKGYHALQVHRVAHALWHQGRKVLALALQSRVSEVVFGVDIHPAAKIGEGILLDHGTGVVIGETAIVGNRVSLMHGVTLGGTGKEIGDRHPKVGEGALIEASATILGNIKIGEGAMIAAGSLVLKDVPPHCIAAGIPAKVISALQEHDPSLTMKHDASKDLFTHVATNFIDEKPNGAQNPDRNEVNN 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01639 346 Pfam Serine acetyltransferase, N-terminal 65 167 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma01g01639 346 Gene3D Hexapeptide repeat proteins 199 327 - -
Gma01g01639 346 SUPERFAMILY Trimeric LpxA-like enzymes 82 313 IPR011004 -
Gma01g01639 346 PANTHER SERINE ACETYLTRANSFERASE 61 329 - -
Gma01g01639 346 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 61 329 - -
Gma01g01639 346 SMART SATase_N_2_a 65 168 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gma01g01639 346 Gene3D serine acetyltransferase, domain 1 56 198 IPR042122 -
Gma01g01639 346 Pfam Bacterial transferase hexapeptide (six repeats) 249 282 IPR001451 -
Gma01g01639 346 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 258 286 IPR018357 GO:0016740
Gma01g01639 346 CDD LbH_SAT 196 296 IPR045304 -
Gma01g01639 346 TIGRFAM cysE: serine O-acetyltransferase 136 298 IPR005881 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01639 Gma-Chr1 52119537 52122745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01639 54 335 Miscellaneous Gene Families AT2G17640 69.595 3.97e-140 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01639 K00640 - gmx:100796461 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01639 01 52119537 52122745 Gma01g01639 01 52119537 52122745 ECH
Gma01g01639 01 52119537 52122745 Gma11g00767 11 6418684 6423674 GST
Gma01g01639 01 52119537 52122745 Gma16g01114 16 27992961 27996915 PCT
Gma01g01639 01 52119537 52122745 Gma02g00383 02 3996898 4000407 PCT