Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01636 ATGAAGATATCTGATGAGAACAGTTCTAAACCAATCAACCCCACAAGTTTTCAAGGAGGGATAGAATGTGTGGGGAACAGAAAGATGGGGCAGAACAGAAGGGCTTTGAGCGTGATCAATCAGGATCTGGTGGCGGAAGGGAGACCTTACCCTTGTGTTGTTAACAAAAGGGCATTGGCAGAAAAACACGATGTTTGTGAGAAGAAGCAGGCGGATCCAGGGCATCGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTAGCACACAGAAAAATCGTGCCGAGGGAACCAAGAAGTCAAACTTGGGGAATTCAAATTCGAATGGATTTGGAGACAGCATATTTGTCGATGAAGAACACAAGCCAACTACGGATGACCAGCCAGTGCCAATGTCTTTAGAGCAGACAGAACCAATGCATAGTGAATCAGATCAGATGGAGGAAGTTGAGATGGAGGATATAATTGAAGAGACTGTTTTGGACATTGATACCTGTGATGCAAACAACCCTCTTGCAGTCGTGGACTATATTGAAGATCTTTATGCCCACTACAGAAAAATGGAGGGTACTAGCTGTGTCTCGCCGGATTATATGGCACAACAATTTGACATTAATGAAAGGATGAGGGCTATACTGATTGACTGGCTAATTGAGGTGCACGACAAATTTGACCTCTTGCACGAGACGTTGTTTCTCACTGTCAATCTTATAGATCGATTTTTGGCAAAACAGACAGTGGTAAGAAAGAAGCTTCAGTTGGTTGGTCTAGTTGCCATGCTTTTGGCATGCAAGTACGAAGAAGTTTCTGTACCTGTGGTGGGGGATCTAATTCTCATATCAGACAAAGCATACACAAGGAAGGAAGTTCTTGAAATGGAGAAGTTGATGGTGAACACATTGCAGTTTAACATGTCTGTGCCAACGGCATATGTTTTTATGAAAAGGTTCCTAAAGGCAGCTCAAGCAGACAGAAAGCTTGAGTTATTGGCTTTCTTCCTGGTAGAGCTAACTCTTGTGGAGTATGAGATGCTGAAGTTCCCTCCATCTTTGCTAGCAGCATCTGCTGTCTACACAGCCCAATGCACAATTTATGGTTTCAAACAATGGAACAAAACATGTGAATGGCACTCCAATTACTCAGAAGATCAGCTATTAGAGTGCTCAACATTAATGGCTGATTTTCATCAGAAGGCTGGGAATGGGAAACTAACTGGGGTACATAGGAAGTACTGCTCATCTAAATTTAGCTATACTGCAAAATGTGAACCACCACGTTTTCTTCTGGAGAAACCATTGTAG 1299 0.4296 MKISDENSSKPINPTSFQGGIECVGNRKMGQNRRALSVINQDLVAEGRPYPCVVNKRALAEKHDVCEKKQADPGHRPITRRFAAQIASTQKNRAEGTKKSNLGNSNSNGFGDSIFVDEEHKPTTDDQPVPMSLEQTEPMHSESDQMEEVEMEDIIEETVLDIDTCDANNPLAVVDYIEDLYAHYRKMEGTSCVSPDYMAQQFDINERMRAILIDWLIEVHDKFDLLHETLFLTVNLIDRFLAKQTVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMVNTLQFNMSVPTAYVFMKRFLKAAQADRKLELLAFFLVELTLVEYEMLKFPPSLLAASAVYTAQCTIYGFKQWNKTCEWHSNYSEDQLLECSTLMADFHQKAGNGKLTGVHRKYCSSKFSYTAKCEPPRFLLEKPL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01636 432 SMART Cyclin_C_2 307 424 IPR004367 -
Gma01g01636 432 Pfam Cyclin, C-terminal domain 307 423 IPR004367 -
Gma01g01636 432 ProSitePatterns Cyclins signature. 209 240 IPR006671 -
Gma01g01636 432 MobiDBLite consensus disorder prediction 89 133 - -
Gma01g01636 432 SUPERFAMILY Cyclin-like 306 425 IPR036915 -
Gma01g01636 432 CDD CYCLIN 208 297 IPR013763 -
Gma01g01636 432 PIRSF Cyclin_A_B_D_E 21 432 IPR039361 -
Gma01g01636 432 Gene3D - 193 305 - -
Gma01g01636 432 SUPERFAMILY Cyclin-like 168 304 IPR036915 -
Gma01g01636 432 Gene3D - 179 419 - -
Gma01g01636 432 CDD CYCLIN 305 391 IPR013763 -
Gma01g01636 432 MobiDBLite consensus disorder prediction 89 112 - -
Gma01g01636 432 PANTHER CYCLINS 22 425 IPR039361 -
Gma01g01636 432 SMART cyclin_7 214 298 IPR013763 -
Gma01g01636 432 SMART cyclin_7 311 393 IPR013763 -
Gma01g01636 432 PANTHER CYCLIN-B2-1 22 425 - -
Gma01g01636 432 Pfam Cyclin, N-terminal domain 179 305 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01636 Gma-Chr1 52085890 52088670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01636 4 428 Core Cell Cycle Gene Families AT1G20610 58.756 5.54e-173 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01636 K21777 - gmx:100798068 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01636 01 52085890 52088670 Gma11g00771 11 6448360 6451618 GST