Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01633 ATGCAGAACCAGAACCCTTCTGAAGATGATTCCACCAAAAAGTCTCCATCTTCTCCCTCTGATGACACATCCCATCCAACCAACAACAACAACAATCCGCAGGGTGAAAGCCTTGTCATGAAAACCGTTTGGCAAGTGTTGGAGGAACTTGGTGGCAGTGGTGATGATAGTGACGGTGACAGTGGCTTTGGTGATGGGGCCCCTGTGGCTGTGGCAGTAGGTGGTGGTGGTGATGATAATGGTGATGGTGATGGTAGCGTTGGTGGTGGGGCCACTGTGGCTATGGAAAAGAGTGATGATGATAGTGACAATAATGGTGACAATAGTGGTAGTAATTTGGCTGTGGCTGTTGTCGTGGGTGGtggtgacggtagtggtagtagtggtgttggggccactgtgactgtgtctgtggcagtgagtggtggtggtggtaatcatggtggcggtagcagtggtggtggtggtgggggtcctgtggctgtttctgtggctgtgggtggtggtTCAACGGTGGTGGAGAGTGTGGTTGTGAGTACTGAAGGAGTGCAGGGGAGAAAGAGAAAGACTTCTATCGTGAGAGACCCTCCCACAGGAAGACCTACTTGTCCTCTTTGCCAAAAAGAGTTTCCAACCTGGAAGGGCGCGTTTGGCCACATGCGTGCACACCCAGACCGTGATTATCGCGGTTTCTTTAAACCTCCTGTGTTTGGATCCCCATCCTCAACCCAAGATCAACCACCTAGGGATGACAAGGGTGATGATAGTGCAAAGAAGAGTTCTGGTGAGGTTAACAATGGGGAGAAAGGTTCAGCATCATCGCATGTTCGAGTGCCGATGTTTGATCTGAATGAACCAATAGAGGAAGAGGGATCCTCTCATGCTGCCGAGCCTGCTGAAGACATGAGTTCCGAGGAGGGAAAGGGTTTTGGATTTGACTTGAATGAGATGCCCCCAGCTGAAGATTAA 969 0.4221 MQNQNPSEDDSTKKSPSSPSDDTSHPTNNNNNPQGESLVMKTVWQVLEELGGSGDDSDGDSGFGDGAPVAVAVGGGGDDNGDGDGSVGGGATVAMEKSDDDSDNNGDNSGSNLAVAVVVGGGDGSGSSGVGATVTVSVAVSGGGGNHGGGSSGGGGGGPVAVSVAVGGGSTVVESVVVSTEGVQGRKRKTSIVRDPPTGRPTCPLCQKEFPTWKGAFGHMRAHPDRDYRGFFKPPVFGSPSSTQDQPPRDDKGDDSAKKSSGEVNNGEKGSASSHVRVPMFDLNEPIEEEGSSHAAEPAEDMSSEEGKGFGFDLNEMPPAED 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01633 322 MobiDBLite consensus disorder prediction 282 307 - -
Gma01g01633 322 MobiDBLite consensus disorder prediction 247 262 - -
Gma01g01633 322 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 131 322 - -
Gma01g01633 322 MobiDBLite consensus disorder prediction 226 322 - -
Gma01g01633 322 MobiDBLite consensus disorder prediction 1 113 - -
Gma01g01633 322 MobiDBLite consensus disorder prediction 1 39 - -
Gma01g01633 322 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 131 322 - -
Gma01g01633 322 ProSitePatterns Zinc finger C2H2 type domain signature. 203 223 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01633 Gma-Chr1 52030451 52031677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01633 196 242 C2H2 Transcription Factor Family AT4G35280 44.681 2.92e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gma01g01633 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01633 - - gmx:102670331 308.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01633 01 52030451 52031677 Gma11g00776 11 6492198 6493393 GST