Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01630 ATGGCCTATTGTTATGCAGCAAGGCAGCAAATCGATACCACTATCCACAAGTCCGCAACAACAAATCACACTAATGTTTTGCAGGATTACAACGCTAAAATTTCAGATTTTGGCCTGGCCAAATTAGGGTCTTCTGGTGGAGATTCACACGTGAGTACCAGGATCATGGGAACATATGGCTATGCTGCTCCAGAATACGTTGCAACAGGTCACCTTCATGTGAAGAGTGATGTTTATGGTTTTGGTGTGGTGCTGCTTGAAATGCTGACAGGGATGAGGGCATTTGATAGAAACCGCCCCATAGAGCAGCAGAATCTAGTTGAATGGGCTAAGCCTTCTCGCTCTGATAAAAGCAAGTTGAAAAGCATTATGGATGAAAGGATAGAGGGTCAGTATTCAACCAAGGCAGCATTGAAAGCAGCACAGATTACCCTAAAATGCCTTGAACGTAACCCTAAAAAAGTCCTCATATGA 474 0.4367 MAYCYAARQQIDTTIHKSATTNHTNVLQDYNAKISDFGLAKLGSSGGDSHVSTRIMGTYGYAAPEYVATGHLHVKSDVYGFGVVLLEMLTGMRAFDRNRPIEQQNLVEWAKPSRSDKSKLKSIMDERIEGQYSTKAALKAAQITLKCLERNPKKVLI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01630 157 PANTHER OS01G0588500 PROTEIN-RELATED 1 154 - -
Gma01g01630 157 ProSiteProfiles Protein kinase domain profile. 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01630 157 SUPERFAMILY Protein kinase-like (PK-like) 25 154 IPR011009 -
Gma01g01630 157 Pfam Protein kinase domain 25 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01630 157 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 1 154 - -
Gma01g01630 157 Gene3D Transferase(Phosphotransferase) domain 1 4 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01630 Gma-Chr1 51990815 51991991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01630 25 149 Glycoside Hydrolase AT3G07070 52.756 7.14e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma01g01630 Pkinase 7.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01630 - - gmx:100778116 240.35