Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01629 ATGGAGTCCACTTTGCTCACCAATCTACTAGTCTTCAACAACACCCTCCAACCAGAGTTAATGAGGAGTGTGCATGTGTACCGCCGAGGGGATGGAGAGAAAAGGGAAGTTGAGAGAGAGTTTGTGTTTTCAGAGAGCGGCTCCTATGGGGAAATGCAGGCTACCCCAATTCCTGGATTGGTAAAATCTCGTGTTTCTGAAGTGTGTGAAGGGCACCGAAATGGAGTGTGGCTTTGTGTCTTTGCGTTCCATGCCGATCACACTCCTCAATTTTGCCGCATTCCACCGGTTTTGTTGGTCACAAGAAACCCAAAGCTTAAGATGATTCCAAACTTGCTTGATGATCTCCATGTGATATACAAGTTGGACCGGAAGGAGGAAGACAGTGATATAGCACAAGACTATACAGGGGAAGAAAGGCAAGGAAACAGCAACAATTGCCAACCATCATGGAAAGTCTTTCCTGTTCTTGATCAGGATCTCAATTGTCTTCCTTATGAAGACGACGAGTCTGAGTCACTGGACAATGAGACAGATGTTGAAAGCTCACCAGGTTTGCTAGCAAAGAAAAAGAGGGCACCCAGTGATCTTGTAGCAAAAATTTCTTTATCAGATTTGGTCAAGTACTTTGGTATGCCAATTGTAGAAGCATCAAGAAATCTAAATGTTGGGCTCACTGTTCTCAAGAGAAAGTGCAGAGAATTTGGTATTCCCCGCTGGCCTCATAGGAAGATCAAATCACTTGACAGTCTCATTCATGATCTTCAGGAAGAGGTAAAGAGCCAAGAATTGGAGGACAGGGAAGCAGCTTTGGCAGTGGCCAAGAGGCAAAGGATGTTGGAGAGTGAAAAGGAAAACATAGAGAAGAAACCCTTCATGGACATACAAAGTGAGACCAAGAGATTCAGGCAAGATGTTTTCAAGAGAAGACATAGAGCTAGAGCTGTTGGAAAACACAATTCAACAGTATCCAGCACATAG 981 0.4424 MESTLLTNLLVFNNTLQPELMRSVHVYRRGDGEKREVEREFVFSESGSYGEMQATPIPGLVKSRVSEVCEGHRNGVWLCVFAFHADHTPQFCRIPPVLLVTRNPKLKMIPNLLDDLHVIYKLDRKEEDSDIAQDYTGEERQGNSNNCQPSWKVFPVLDQDLNCLPYEDDESESLDNETDVESSPGLLAKKKRAPSDLVAKISLSDLVKYFGMPIVEASRNLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHDLQEEVKSQELEDREAALAVAKRQRMLESEKENIEKKPFMDIQSETKRFRQDVFKRRHRARAVGKHNSTVSST 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01629 326 Coils Coil 245 265 - -
Gma01g01629 326 PANTHER PROTEIN RKD5 11 318 - -
Gma01g01629 326 ProSiteProfiles RWP-RK domain profile. 183 268 IPR003035 -
Gma01g01629 326 Pfam RWP-RK domain 201 248 IPR003035 -
Gma01g01629 326 PANTHER PROTEIN RKD4 11 318 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01629 Gma-Chr1 51973956 51978840 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01629 16 326 AtRKD Transcription Factor Family AT4G35590 46.789 7.38e-86 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Gma01g01629 RWP-RK 2.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01629 - - gmx:113001653 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01629 01 51973956 51978840 Gma01g01629 01 51973956 51978840 ECH
Gma01g01629 01 51973956 51978840 Gma11g00781 11 6523158 6536052 GST