Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01623 ATGGGAGGCTTATTACACTTTTTTGAATTCAATCAAGGGAGGATGGCCAAGAAAGTCCTTGCTCGTAAGAGACATCATGGTGGCCTGGAAGCTCCTCGCAATAGTCTAGATCTGCAAGTACAAACACCTAAGAACTACTGTCCAGAAGGAAAATTACCATACAATTATCAAGTAGAAGAAAAGGGCAGGTCTGAGAATAACCGCTATTCAAACGTGGGTTCAATGAAAAAACTGATCAATGAGGAGCTATCCAAACAATCAAGCACCAGACAAAATGCGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATACAATGCCATTAGACACTAAATATGTTGTTCCATCAGACAAAAAAATAAGTGAAAACATGGGGAAGAGGTCATCAGTCAATGGAGTGAATCGAAGGGTTTCAGTTAGTTGGGGTTCTTCCAACTTTAATTCTTCTAGCCAGATGGATTTTGATTCATTATATAAAGACATAGGTGATGAAGATGATGGATGGAACCGGAGTTTTGGAGAACCAAGGCCGCGAGAACATCCTCAGGAAGAGGAACTCCAAAAATTCAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTCTGGAGTGTTCAAAGGTTGTTGAAATTGGCAGTGCTCCTAGACAATTGCTTGCTCAAGAAAACCTGAACAAGGAAAAGGTGATGCATAATGATTCAGTTTTACAAAGAGCAGCAGCACGGAAACTTGCAGATCTTGACAGCCATTCATTCAAAATGCCACCTGACAGTTATGGTTCAGAATATCATGGTAACATGATGGACCTAATCCCAGCTATGCAAAGGAGAACATTTCCTCCAAGGAGCAGAACACTAAGTAGAGACTTTGAGGAGTCCTTACTGATGAAATCTTGCAACAAATTAGACATGTCTTCTTCTCCCACTAGGATAGTTATCTTGAAGCCTGGTCCTGATAGCATTCGCAACCATGAAGAGAATTGGACTATTTCGTCGGGAACTATACAAGGAAGAAATAGTATAGAAGATTTTCTTGAAGAGGTGAAAGAGCGTTTGAAATGTGAACTGCAAGGTAAAATTGTCAAAAAAGGTTCTGTGGTTCGAGGGAGTGGAATTGAGACACCTTACAATGAAAAGCCATCTGATCCTAAACTAATAGCCCGTCACATAGTAAAGCAAGTCAGAGAAAGTGTGACTAGAGATACTGACACAACTTTACTCCACTCAGAATCAACAGGATCATACAAAAGTGAAATGCAGTTCAATGGACCAAGCTCCCCAGAATTTTTCAGCAGAGATACCAGGAGGTTCTTGTCCAAGAGGCTAAGAAATGTTGTGAGAAGGGAAGCACATGCTGACATTCCTGAGGGAAAATCAATGTCACTTGCATTAGACAACCATAAAGCTAGACTAAAGCCAGCGGAGAATATTAAGAAGTATGCAAGTAACTGGGAAATTTCCAAAGAGGACACATCAATACAAACAGGATCTTTCAGGCATGAACTTGATGAGAATATATTTCTCCACAAGGAGTTATCACCAAGAAACCTTGTAAGATCCTTGTCTGCTCCTGTATCACATTCAGGAACATCATTTGGTAAGCTTCTTCTAGAGGACCGCCATATTTTAACTGGTGCTCAGATTCGGAGGAAGCTTGAAGCTGTTGAAACTATGTCTGTTGATGTCAAGAAACGGAAAAATGATAGATTTAATATTAAAGAAAGAGTCTCCAATTTTAGATATAATCTTGCTTTAAGAGGGAGGCTTTTTGGCAGAAGGGTTCAATCAATGGTAGAATCACATGGTAACGAATTTGGTCCCTTTGTGAGAGATGCCACAAGTGGACCAACAGTTCTCATGAACTGTGGTGAGAGGCATGAGAACTCCACTGAGGTACCTCCTAGTCCTGCTTCTGTGTACAGCAGTGCTCATGAAGACATTTGGAGGCAAACTGAATATTTAAGTCCAATATCAACTCCTGACGTGTCTTCAAGAGACGATAATGTTGTGCCCCAGGTTTTCAGGGATATCAGCTCTGGTTTGAATGAGCTAAGGAGACAACTCAATCAACTTGAATCTGATGGTCTTGAGGACTTGACTATGAAACAGGAGCCTGCTGAGTCTGAATTAGACCAATTAGAGAATCCAGCAGAATCTTACATAAGAGATCTACTTGTTGCTTCTGGTCTGTACTTCGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCTGTTTATGAAGAAGTGGAAGAATCTCACAAGAAATTGGTCAAGGAAAATGATGAAAGCTGTATCAAGGATCAGAATGAGAGTAAGCTAGACCACAAAGTTTTGCTTGATTTGTTAAATGAGGCACTTCCAGTTGTTCTTGGACCTCCTTTGACATTGTCTAGATTCAGAAGGAAATTAAGCAACCCTTCCATGTTGCCACCTTCTGGAAAGGAACTGTTGAAGTTAGTGTGGGACATTATCCGTGTTTCTTTTTATCCTCCATCTGACATATCTACTAATTCACTTGATACTTTGGTGGCTCAACACCTAGGATCCATCCCTTGGTCTGGATTAATAAATGATGAGATCAATATTTTGGAAAGAGATATAGAATGTCTAATAACTGATGATCTGGTTGAAGAACTCACAAAGGATATGTTCTAA 2676 0.4032 MGGLLHFFEFNQGRMAKKVLARKRHHGGLEAPRNSLDLQVQTPKNYCPEGKLPYNYQVEEKGRSENNRYSNVGSMKKLINEELSKQSSTRQNAPSLVARLMGIDTMPLDTKYVVPSDKKISENMGKRSSVNGVNRRVSVSWGSSNFNSSSQMDFDSLYKDIGDEDDGWNRSFGEPRPREHPQEEELQKFKKEFEAYQAARFLECSKVVEIGSAPRQLLAQENLNKEKVMHNDSVLQRAAARKLADLDSHSFKMPPDSYGSEYHGNMMDLIPAMQRRTFPPRSRTLSRDFEESLLMKSCNKLDMSSSPTRIVILKPGPDSIRNHEENWTISSGTIQGRNSIEDFLEEVKERLKCELQGKIVKKGSVVRGSGIETPYNEKPSDPKLIARHIVKQVRESVTRDTDTTLLHSESTGSYKSEMQFNGPSSPEFFSRDTRRFLSKRLRNVVRREAHADIPEGKSMSLALDNHKARLKPAENIKKYASNWEISKEDTSIQTGSFRHELDENIFLHKELSPRNLVRSLSAPVSHSGTSFGKLLLEDRHILTGAQIRRKLEAVETMSVDVKKRKNDRFNIKERVSNFRYNLALRGRLFGRRVQSMVESHGNEFGPFVRDATSGPTVLMNCGERHENSTEVPPSPASVYSSAHEDIWRQTEYLSPISTPDVSSRDDNVVPQVFRDISSGLNELRRQLNQLESDGLEDLTMKQEPAESELDQLENPAESYIRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVYEEVEESHKKLVKENDESCIKDQNESKLDHKVLLDLLNEALPVVLGPPLTLSRFRRKLSNPSMLPPSGKELLKLVWDIIRVSFYPPSDISTNSLDTLVAQHLGSIPWSGLINDEINILERDIECLITDDLVEELTKDMF 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01623 891 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 890 - -
Gma01g01623 891 Pfam DUF761-associated sequence motif 89 107 IPR032795 -
Gma01g01623 891 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 890 - -
Gma01g01623 891 Coils Coil 673 693 - -
Gma01g01623 891 Pfam Domain of unknown function (DUF4378) 718 885 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01623 Gma-Chr1 51927306 51931915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01623 75 890 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 40.376 1.03e-154 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01623 - - gmx:100789616 1732.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01623 01 51927306 51931915 Gma01g01623 01 51927306 51931915 ECH
Gma01g01623 01 51927306 51931915 Gma11g00788 11 6574318 6580222 GST
Gma01g01623 01 51927306 51931915 Gma16g01083 16 27360350 27364112 PCT
Gma16g01083 16 27360350 27364112 Gma01g01623 01 51927306 51931915 PCT