Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01601 atgggagagaagacatcacgaagGTACCTTTTTTTAACCAAGGAAGATATTCTTAGCCTTCCCTGCTTCCAGAATCAAGAAATTATTGCAATCAAGGCTCCAAAAGCTAGTTGCATCGAGGTCCCTGATCCTGATGAGGAATTAGGTTTTCGGCAAAGGCAGTACAAAATGATTGTTCGAAGTGCCATTGGACCAATAAATTTGTATCTCTTGAGCAAGGACGACCACAAGTTTGAGGATGATAGTGCCAAACGGATGAAATTAATGGATCCATCATGGAATAGTGATCCCATCAGAAAGAGGGGTGTGGGATTATTAGAAAGCCAACATGATGAAAAAAATCCTTCTGAGCGTTTCAGTTTGCAGGGTTCACAAGCATTTGAAATTCAAGAAATTACTCCCACGGATTTTGAAGTATGTATTACTTGA 429 0.3753 MGEKTSRRYLFLTKEDILSLPCFQNQEIIAIKAPKASCIEVPDPDEELGFRQRQYKMIVRSAIGPINLYLLSKDDHKFEDDSAKRMKLMDPSWNSDPIRKRGVGLLESQHDEKNPSERFSLQGSQAFEIQEITPTDFEVCIT 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01601 142 Gene3D - 1 74 - -
Gma01g01601 142 Pfam E2F transcription factor CC-MB domain 5 71 IPR032198 GO:0046983
Gma01g01601 142 PANTHER TRANSCRIPTION FACTOR E2F 3 139 IPR015633 GO:0000978|GO:0006357
Gma01g01601 142 PANTHER TRANSCRIPTION FACTOR E2FC 3 139 - -
Gma01g01601 142 SUPERFAMILY E2F-DP heterodimerization region 3 74 IPR037241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01601 Gma-Chr1 51648915 51652227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01601 7 84 E2F-DP Transcription Factor Family AT1G47870 61.538 1.45e-24 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01601 K06620 - gmx:100797301 261.536