Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01595 ATGTTTCCCCTCCAATGCAGCAACCACCCCATGTGCGCTTTCTCCGCCGCCGTCACCACCATCCTCCTCCTATTCCCGGCAGCGACATCCCAAGCCCAGATTCTAAAAAAGGAAACTTACTTTTTCGGTCCCTTCAACCAGTCCTACTTCACCACGTTCGCGGTGTTGCCCAGCGCCGCCATCAACCTCGGCGCCCTCCAAGTAACTCCGGACAGCACCGGCAACGTGTCCCTCGCCAACCAGTCCGGCAGAATCTTCTTCAGCACCCCCTTCACCCTCTGGGACGATGAAAACTTAAACGGAAAACTCGTTTCCTTCAACACCTCCTTTCTCATCAACGTTTTCCGTCCCCAAAACAACCCTCCCGGCGAAGGCATCGCGTTCCTCATCGCGCCGTCTTCCTCCACCGTCCCTAACAACAGCCATGGCCAGTTCCTCGGCCTCACCAACGCCGCCACCGACGGCAACGCCACCAACAAGTTCATCGCCGTCGAACTTGACACCGTGAAGCAGGACTTCGACCCCGACGACAACCACATCGGGTTAGACATTAACAGCGTCAGGTCCAACGTTAGTGTCTCACTTACCCCCTTGGGGTTCGAGATCGCGCCCAACGTCACGCGCTTCCACGTGCTGTGGGTGGATTACGACGGTGACCGGAAGGAGATTGACGTGTACATCGCGGAGCAGCCAGATAAGGATGTTCCCATTGTTGCGAAACCGGCAAAGCCGGTTTTGAGTTCCCCTCTAGATCTTAAACAGGTCCTGAACAAGGTTTCTTATTTTGGGTTCTCAGCTTCCACCGGTGACAACGTTGAACTAAACTGCGTGCTGAGGTGGAACATTACTATTGAGGTGTTTCCTAAAAAGAATGGAAATGGAAAAGCATTGAAGATTGGTTTAAGTGTCGGGTTGACTCTGTTGGTTCTCATTGTGGCGGGTGTTGTTGGGTTTAGGGTTTATTGGATACGAAAGAAGAAAAGGGAAAATGAGTCTCAGATTTTGGGAACCCTAAAGAGTCTACCTGGAACTCCCAGAGAGTTTAGGTATCAGGAGCTGAAGAAAGCGACAAATAATTTCGATGACAAGCATAAGCTTGGACAGGGTGGATACGGCGTCGTTTATAGAGGGACACTTCTTCCCAAGGAGAATCTTCAAGTGGCCGTTAAGATGTTCTCCAGAGATAAGATGAAAAGCACTGATGATTTCTTGGCCGAACTCACCATTATCAATCGCCTCCGTCACAAAAACCTTGTTCGCTTACTCGgatggtgtcacagaaacggggtgttgctcttagtgtacgattacatgcctaatggaagtttggacaaccacattttctgtgaggaaggtagcagcactacaccactaagttggcctctaaggtacaagatcatcacaggggtggcttctgcattgaactacctacacaacgagtatgatcagaaagtggtacacagagaccttaaggccagcaacatcatgctggattcgaacttcaatgcccggttaggcgacttcggcttggcgcgggcattggagaacgataaaacatcatatgcagagatggaaggagtgcatggcacaatggggtacattgcgcccgagtgctttcacacggggagggcaacaagggaatctgatgtatatggttttggagcagtgttacttgaggtggtgtgtggtcagagaccatggacaaagaatgaggggtatgagtgcttggtggattgggtatggcacctgcatcgtgagcaaaggatacttgatgcagtgaatcctagacttgggaatgactgtgtggttgaagaggcagagaGGGTCCTGAAATTGGGACTGGCATGCTCTCACCCCATTGCAAGTGAGAGACCAAAGATGCAAACTATTGTTCAGATCTTATCAGGTTCAGTGCATGTGCCTCATGTTCCACCTTTCAAGCCAGCTTTTGTGTGGCCAGCTATGGATCTTTCAAGCCTTGCAAGTGACCTCACAACACAAACTACAACAACTGAGTACACACCCATGAGCAGTGACACACATTCTATGCATGTTCAATTCTCTGATAGCAGCTCTCTGGTCTAA 2085 0.3703 MFPLQCSNHPMCAFSAAVTTILLLFPAATSQAQILKKETYFFGPFNQSYFTTFAVLPSAAINLGALQVTPDSTGNVSLANQSGRIFFSTPFTLWDDENLNGKLVSFNTSFLINVFRPQNNPPGEGIAFLIAPSSSTVPNNSHGQFLGLTNAATDGNATNKFIAVELDTVKQDFDPDDNHIGLDINSVRSNVSVSLTPLGFEIAPNVTRFHVLWVDYDGDRKEIDVYIAEQPDKDVPIVAKPAKPVLSSPLDLKQVLNKVSYFGFSASTGDNVELNCVLRWNITIEVFPKKNGNGKALKIGLSVGLTLLVLIVAGVVGFRVYWIRKKKRENESQILGTLKSLPGTPREFRYQELKKATNNFDDKHKLGQGGYGVVYRGTLLPKENLQVAVKMFSRDKMKSTDDFLAELTIINRLRHKNLVRLLGWCHRNGVLLLVYDYMPNGSLDNHIFCEEGSSTTPLSWPLRYKIITGVASALNYLHNEYDQKVVHRDLKASNIMLDSNFNARLGDFGLARALENDKTSYAEMEGVHGTMGYIAPECFHTGRATRESDVYGFGAVLLEVVCGQRPWTKNEGYECLVDWVWHLHREQRILDAVNPRLGNDCVVEEAERVLKLGLACSHPIASERPKMQTIVQILSGSVHVPHVPPFKPAFVWPAMDLSSLASDLTTQTTTTEYTPMSSDTHSMHVQFSDSSSLV 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01595 694 SMART serkin_6 360 687 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01595 694 Pfam Protein tyrosine and serine/threonine kinase 363 634 IPR001245 GO:0004672|GO:0006468
Gma01g01595 694 MobiDBLite consensus disorder prediction 671 694 - -
Gma01g01595 694 PANTHER - 19 681 - -
Gma01g01595 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Gma01g01595 694 ProSitePatterns Legume lectins beta-chain signature. 162 168 IPR019825 -
Gma01g01595 694 ProSiteProfiles Protein kinase domain profile. 360 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01595 694 CDD STKc_IRAK 366 634 - -
Gma01g01595 694 Gene3D - 37 298 - -
Gma01g01595 694 Gene3D Transferase(Phosphotransferase) domain 1 438 640 - -
Gma01g01595 694 Pfam Legume lectin domain 52 290 IPR001220 GO:0030246
Gma01g01595 694 SUPERFAMILY Protein kinase-like (PK-like) 342 672 IPR011009 -
Gma01g01595 694 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 19 681 - -
Gma01g01595 694 CDD lectin_legume_LecRK_Arcelin_ConA 39 281 IPR001220 GO:0030246
Gma01g01595 694 ProSitePatterns Protein kinases ATP-binding region signature. 366 390 IPR017441 GO:0005524
Gma01g01595 694 Gene3D Phosphorylase Kinase; domain 1 345 437 - -
Gma01g01595 694 SUPERFAMILY Concanavalin A-like lectins/glucanases 40 289 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01595 Gma-Chr1 51550886 51555168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01595 64 646 Receptor kinase-like Gene Family AT2G37710 39.180 1.21e-123 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gma01g01595 PK_Tyr_Ser-Thr 9.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01595 - - gmx:100780014 1381.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma11g00815 11 6851959 6855446 Gma01g01595 01 51550886 51555168 ECH
Gma01g01595 01 51550886 51555168 Gma01g01595 01 51550886 51555168 ECH
Gma01g01595 01 51550886 51555168 Gma11g00815 11 6851959 6855446 GST