Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01588 ATGTTGGAGTACCTCTATATGCAAGGGAATTCTTTACAGGGAATCATACCATCCTCTTTAGCATCACTCAAATGTCTCAAATGTTTAGACCTGTCACGAAACTGCTTGTCTGGATCAATTCCAACTATTCTGCAGAACATTTCTTTCTTGGAATATTTCAATGTAACATTTAACATTTTGGATGGTGAGGTACCAATTGAAGGTGTCTTTGGAAATGCAAGTCGGTTAGTGGTGATTGGAAACAGTAAGCTTTGTGGAGGAATTTCAGAACTGCATCTACCACCATGCCCCGTCAAAGGTAAGAAACTTGCAAAATTCAGCTTTGGGATTCTTGTGTTGGAAATGCTTACTGGAATCAGACCCACTGATGAATTCTTTGAAGATGGTCAAAATTTGCATAAGTTTGTGGAAAATTCATTTCCTAATAATCTTTTAAAAATTTTGGACTCATCACTTGTACCAAAACAAGGACAAGCAGCAATAGAAGAAGTAAACAATTCGAATCTTACTCCAACTGTTGAAAAGTGCTTAGTTTCACTCTTTAAGATTGGACTTTCTTGCCCATTGGAATCATCAAAAGAAAGAATGAATATGGTGGATGTCACTAGAGAGCTAAGCAAAATCAGAAGAGCCTTTCTTCCTGAATCCTTAACAAGCTCCATATGGCATGAAGCTTTCTGCGCTCCAGTCAAACCAGAACAGCGGCTGTGGACCGACAACGACGAGATCAAGCTCTTGCAAGGGTTCCTCGACTACACATCACAGCGAGGATCCTCGCACCACAATGACACCGCTTTGTTCTACGACCAAATCAAGTCGAAGCTCCAACTCGATTTCAACAAGAATCAGCTTGTGGAGAAGATCCGAAGGCTGAAGAAGAAGTGTTGGAACGTCCTTAACAAGATTTGCTCCGGCAAGGAATTCTCCTTCAAGAGCGCTCACGATCAAGCCACCTTCGAAATCTCGCACAACCCTAAGCCCTGTAATTCTTAA 993 0.4119 MLEYLYMQGNSLQGIIPSSLASLKCLKCLDLSRNCLSGSIPTILQNISFLEYFNVTFNILDGEVPIEGVFGNASRLVVIGNSKLCGGISELHLPPCPVKGKKLAKFSFGILVLEMLTGIRPTDEFFEDGQNLHKFVENSFPNNLLKILDSSLVPKQGQAAIEEVNNSNLTPTVEKCLVSLFKIGLSCPLESSKERMNMVDVTRELSKIRRAFLPESLTSSIWHEAFCAPVKPEQRLWTDNDEIKLLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKCWNVLNKICSGKEFSFKSAHDQATFEISHNPKPCNS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01588 330 PANTHER OS04G0122200 PROTEIN 2 105 - -
Gma01g01588 330 PANTHER LRR RECEPTOR-LIKE KINASE 106 217 - -
Gma01g01588 330 Pfam Protein of unknown function, DUF573 234 323 IPR007592 GO:0006355
Gma01g01588 330 Gene3D Ribonuclease Inhibitor 1 101 IPR032675 -
Gma01g01588 330 SUPERFAMILY L domain-like 2 79 - -
Gma01g01588 330 Gene3D Transferase(Phosphotransferase) domain 1 102 210 - -
Gma01g01588 330 PANTHER LRR RECEPTOR-LIKE KINASE 2 105 - -
Gma01g01588 330 SUPERFAMILY Protein kinase-like (PK-like) 106 217 IPR011009 -
Gma01g01588 330 PANTHER OS04G0122200 PROTEIN 106 217 - -
Gma01g01588 330 Pfam Leucine Rich Repeat 26 46 IPR001611 GO:0005515
Gma01g01588 330 Pfam Leucine Rich Repeat 2 23 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01588 Gma-Chr1 51466393 51472506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01588 234 323 GeBP Transcription Factor Family AT3G04930 76.087 3.27e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gma01g01588 DUF573 1.3e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01588 - - gmx:100790030 172.94