Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01586 ATGGGAACCTCGGTGGCGGGTCTAGCTCCGGGTCTGTCACGGAAGCTGAAGAAGGTTCAAGAATCTCGGATCGACACGCCTCATCTCTTGTCTTCGCTCAACACGCTCTCTTCCTTCTACGACGACAACACTCCTCAGGCGCGTCGCAACCTCCGATCCACCATCGAGAAGCGCGCCCTCTCCATCAACTGCGAATTCCTCGACGCTTCCCACGCCGCGCAGCTGATAAATGCACTTAGAGAAGAAGAGCTGAATGAAAACTTTTTCAAGGCATTGTCTCATGTCCAAGAGATTCATGCCAATTGCAAAGTGTTGCTTAGGACACATCATCAGCGTGCTGGTTTAGAGCTGATGGATATGATGGCTGTGTATCAAGAAGGAGCTTATGAGCGCCTATGCAGGGAAAGATCTGTCCTTTTCAAATATTGTGCAGAAGAGGTAGCCAATATGAGACACAACGCACTATTTAGAAGATTTATAAGTGCTCTTACACGTGGAGGACCTGGTGGATTGCCTCGACCAATTGAAGTGCATGCTCATGACCCACTACGATATGTCGGTGATATGCTAGGCTGGTTGCATCAGGCCTTGGCATCTGAACGTGAACTTGTAGCTGTATTACTTGATCCAGATACAATTACCGATTCTGGTCCAAAGCAATTCTCCAATAACTCTGAGGATGGCTCTGGGAAGACAGAATCTGACTTGATGTTTGTTCTTGATAGAATTTTTGAAGGATCTCAACCAAGTCTTATAGTATCCTACAAACTCAGTAGTACACTTGAATTTTACTGCTACACTATCTCAGATTTACTTGGGCGAGAAACTGCACTTTGTAATACACTATGGGCACTGAAAGATGCTGCTCAGAATACATTTTTTGATATTTTGAAAGGCCGAGGGGAAAAGCTTTTGCGGTATCCCCCACTTGTTGCTGTTGATCTTTCCCCGCCACCAGCAGTGACGGAAGGGGTATCTGTACTTCTTGAAATTATCGACAACTACAACTGCATGATGGTTCCTGCTTCTGGCCAAAAACCTGCTTTTGGTCCAGTTATATCTGCTATACTGGATCCAATAGTTCAGATGTGTGAACAAGCAGCGGAGGCACACAAGTCAAAGGGAGCTGGCCACTCATCAAGAAGGAGTGGGATGAGTTTTGACTGTGGTCAACTTACTAAATCATCAGTTGATGCAATTTTGTCAAATAGTAGCTCTGTGTCTTCCTCACTGGCTTTCACGATATTTTTTATTCCTCTTTTAAGAAGACCGATTCGACCACCCACTACTAAGAACCTCCTGATGCCATTCTTCTTTCTTGGATTAACTAGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCGGCTGCCATACAGCCGTCCATTCCAGTCTTTACCTTTCTGTTGGCTGTAATGATGGGATACGCCAGGACATACAGTAATGTGTATCTGTATAGACCTTTTCATGTAGTACAGAAAGAGTGA 1512 0.4464 MGTSVAGLAPGLSRKLKKVQESRIDTPHLLSSLNTLSSFYDDNTPQARRNLRSTIEKRALSINCEFLDASHAAQLINALREEELNENFFKALSHVQEIHANCKVLLRTHHQRAGLELMDMMAVYQEGAYERLCRERSVLFKYCAEEVANMRHNALFRRFISALTRGGPGGLPRPIEVHAHDPLRYVGDMLGWLHQALASERELVAVLLDPDTITDSGPKQFSNNSEDGSGKTESDLMFVLDRIFEGSQPSLIVSYKLSSTLEFYCYTISDLLGRETALCNTLWALKDAAQNTFFDILKGRGEKLLRYPPLVAVDLSPPPAVTEGVSVLLEIIDNYNCMMVPASGQKPAFGPVISAILDPIVQMCEQAAEAHKSKGAGHSSRRSGMSFDCGQLTKSSVDAILSNSSSVSSSLAFTIFFIPLLRRPIRPPTTKNLLMPFFFLGLTRIFGNQLLFLIGLSYTNPTYAAAIQPSIPVFTFLLAVMMGYARTYSNVYLYRPFHVVQKE 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01586 503 SMART COG6_2 31 477 IPR010490 GO:0006891|GO:0017119
Gma01g01586 503 PANTHER COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6 76 134 IPR010490 GO:0006891|GO:0017119
Gma01g01586 503 PANTHER COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6 134 380 IPR010490 GO:0006891|GO:0017119
Gma01g01586 503 PANTHER COMPONENT OF OLIGOMERIC GOLGI COMPLEX 6 6 73 IPR010490 GO:0006891|GO:0017119
Gma01g01586 503 Pfam EamA-like transporter family 407 481 IPR000620 GO:0016020|GO:0016021
Gma01g01586 503 Pfam Conserved oligomeric complex COG6 135 376 IPR010490 GO:0006891|GO:0017119
Gma01g01586 503 Pfam Conserved oligomeric complex COG6 33 73 IPR010490 GO:0006891|GO:0017119
Gma01g01586 503 Pfam Conserved oligomeric complex COG6 77 134 IPR010490 GO:0006891|GO:0017119
Gma01g01586 503 SUPERFAMILY Multidrug resistance efflux transporter EmrE 415 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01586 Gma-Chr1 51443321 51454804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01586 426 486 Nodulin-like Gene Family AT3G45870 77.049 7.79e-18 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01586 K20293 - gmx:100776278 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01586 01 51443321 51454804 Gma11g00824 11 6910937 6924126 GST