Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01585 ATGCCACAGAACTGCATAGCACCAAAACCAGAATTCTGCAATAGTCATAACTCTGTGGAAGGTCCCCCAGAGATGACTGAGCCACATAACTCAACTGTCCTTTCCTATCCCATGCAAGCCAATGAACAACAACAACAACCTTTCCCAAAACTCATTATGTACCCCATAACTCTGAAGTTTGAGGAGTTGGTTTACAAAGTTAAACTAGAGCAGAAAGGAGGGTGCTGGGGAAGTACATGGACTTGCAAGGAGAAGACCATACTGAATGGAATCACTGGTGTGGTGTGTCCAGGAGAAATACTAGCTATGTTGGGGCCATCAGGCAGTGGCAAAACCACACTTCTCACAGCACTCGGAGGCCGGCTCAACGGCAAACTATCCGGTAAGATCACGTACAACGGCCAACCTTTCTCCGGTGCCATGAAGAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGCTATACCCTCACCTAACCGTCACCGAAACTCTAGTGTTCACTGCACTCCTAAGGCTTCCAAACACCTTGAAACGAGACGAAAAAGTTCAGCATGTTGAGAGAGTGATCACTGAGCTAGGATTGACTCGTTGCAGGAGCAGCATGATAGGAGGACCACTTTTTAGAGGAATATCAGGTGGAGAGAAAAAGAGAGTGAGCATAGGCCAAGAAATGCTCATCAACCCAAGCCTCTTGCTGCTAGATGAGCCTACTTCAGGCTTGGATTCCACCACAGCACAAAGGATCCTTAACACGATCAAACGCCTAGCTAGCGGCGGTAGAACCGTTGTCACAACTATTCACCAACCCTCTAGTAGGCTCTACTACATGTTTGATAAGGTGGTGTTGCTCTCTGAAGGCTGCCCCATCTATTATGGTCCTGCTTCAACTGCCTTGGACTATTTCTCATCTGTTGGCTTTTCCACATGTGTGACTGTCAATCCAGCTGATCTCTTGCTTGATCTTGCCAACGGGATTGCCCCAGACTCCAAGCATGCAACTGAACAAAGTGAGGGACTGGAACAGGAGAGAAAGCAGGTTAGAGAATCTCTCATCTCTGCTTATGAGAAGAATATAGCTACAAGGCTGAAAGCTGAGGTTTGCAGCCTGGAAGCTAACAACTACAATATCATAAAAGATGCTTGTGCAAGAAATTCGATAAAGCCAGATCAATGGTGCACGAGCTGGTGGCATCAGTTCAAAGTACTATTACAAAGGGGAGTGAGGGAGCGAAGGTATGAAGCCTTCAACAGGCTGAGAATATTCCAAGTTGTAAGTGTCGCTTTTCTAGGTGGACTATTGTGGTGGCATACTCCAGAGTCACACATTGATGATCGGGTTGCCTTGCTCTTTTTCTTTTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCAGTTTTCACATTCCCTCAAGAGAGGAGAATGCTGATCAAGGAACGGTCTTCGGGAATGTACCGCCTTTCTTCCTACTTTCTGGCTAGAACAATAGGAGACTTGCCTCTGGAGCTTGCACTACCAACTGCATTTGTCTTCATAATCTATTGGATGGGAGGGCTTAAACCTGATCCTATGACTTTTATCCTTTCACTTCTTGTGGTTCTTTACAGTGTTGTTGTCTCTCAAAGCCTTGGTTTAGCTTTTGGTGCTATTTTGATGGAGGTTAAACAGGCAACTACTCTAGCTTCTGTGACAACCCTTGTGTTTCTCATTGCTGGAGGGTACTATATACAACAGATTCCTCCATTCATAGTGTGGCTCAAGTACTTGAGCTATAGCTACTACTGTTACAAGCTGCTTTTAGGTGTCCAGTACAATGAAAATGACTATTATGAATGCTCAAAGGAGGAGCTGTGCAAAGTTGCAGACTTTCCTCCTATCAAATCAATGGGCTTGAATCATTTGTGGGTTGATGTGTGCATTATGGCCATGATGTTGGTGGGTTATCGACTTGTTGCTTATTTAGCACTGCATAGAGTTAGGTAG 1980 0.4525 MPQNCIAPKPEFCNSHNSVEGPPEMTEPHNSTVLSYPMQANEQQQQPFPKLIMYPITLKFEELVYKVKLEQKGGCWGSTWTCKEKTILNGITGVVCPGEILAMLGPSGSGKTTLLTALGGRLNGKLSGKITYNGQPFSGAMKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNTLKRDEKVQHVERVITELGLTRCRSSMIGGPLFRGISGGEKKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKRLASGGRTVVTTIHQPSSRLYYMFDKVVLLSEGCPIYYGPASTALDYFSSVGFSTCVTVNPADLLLDLANGIAPDSKHATEQSEGLEQERKQVRESLISAYEKNIATRLKAEVCSLEANNYNIIKDACARNSIKPDQWCTSWWHQFKVLLQRGVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPESHIDDRVALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTIGDLPLELALPTAFVFIIYWMGGLKPDPMTFILSLLVVLYSVVVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIVWLKYLSYSYYCYKLLLGVQYNENDYYECSKEELCKVADFPPIKSMGLNHLWVDVCIMAMMLVGYRLVAYLALHRVR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01585 659 Pfam ABC-2 type transporter 398 603 IPR013525 GO:0016020|GO:0140359
Gma01g01585 659 Gene3D - 77 304 IPR027417 -
Gma01g01585 659 Pfam ABC transporter 89 238 IPR003439 GO:0005524
Gma01g01585 659 ProSitePatterns ABC transporters family signature. 210 224 IPR017871 GO:0005524
Gma01g01585 659 Pfam ABC-2 type transporter 267 342 IPR043926 GO:0140359
Gma01g01585 659 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 44 657 - -
Gma01g01585 659 Coils Coil 329 349 - -
Gma01g01585 659 SMART AAA_5 97 287 IPR003593 -
Gma01g01585 659 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 44 657 - -
Gma01g01585 659 CDD ABCG_EPDR 55 292 - -
Gma01g01585 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 302 IPR027417 -
Gma01g01585 659 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 310 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01585 Gma-Chr1 51411160 51414018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01585 87 286 Calmodulin-binding Proteins AT2G36910 30.000 2.39e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01585 K05681 - gmx:100780191 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01585 01 51411160 51414018 Gma01g01585 01 51411160 51414018 ECH
Gma01g01585 01 51411160 51414018 Gma11g00825 11 6946803 6950343 GST
Gma01g01585 01 51411160 51414018 Gma16g01013 16 25442738 25446097 PCT
Gma16g01013 16 25442738 25446097 Gma01g01585 01 51411160 51414018 PCT