Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01562 ATGATGTCGTCAAGAACAAGTTTTTCCGTGGTGCATGGTGAGCCTGAACTGGTGGTGCCAGCAGGACCAACTCCGCGAGAATTAAAGAACCTCTCTGACATAGATGATCAAGAAGGGTTACGTTTTCAGCATCAGGTAATAATGTTCTACCAAAAGAGTCATGTTATGGAAGGAAAACACCCTGCTACGGTTATAAAATATGGTTTGGCTGAAGCACTTGTACACTATTACCCACTAGCTGGTAGGTTGAGAGAATGGCCTAATAGAAAGTTAACAGTGGATTGCAGTGGTGAGGGCATTTTGTTCGTTGAAGCTGAGGCTCATGTTTCACTCAAGGAGCTAGGAAATTCCATTCTGCCACCATGCCCCCACATGAAGGAACTCCTCCTTGATGTTCCTGGATCACAAGGCATTCTCGGATGCCCTCTGCTGTTGTTTCAGGTAACCCGTCTAACATGTGGAGGATTTGCTTTCGCCGCACGCATGAACCACACAATCTGCGACTCACTCGGGCTAGTTCAATTTCTCACCATGGTTGGTGAGATTGCAAGAGGTGTTTCTATATCACAGTTCCCTGTGTGGCAAAGAGAACTATTCAGTGCAAGAGACCCACCAAGAATCACTTATGCACACCACGAATATGATCAAACCAAACATTGCAGCAACAAAGATACAATGGACTTTGACCAAATGGCCCACGAGTCATTTTTCTTCGGCCCAAAAGAGATTGCAACCCTTAGGAGTCACCTTCCTCAGCACCTAAGAAAATGTTCAACTTTTGAGATACTATCTGCTTGCTTATGGAAATGTCGCACCAAAGCACTTGGGCTGGAGCCCAATGAGATAGTGGGCTTATCTCCCTTTATTACTGCTCGTGGCAAAGTGGGCCTACATGTGCCCAATGGGTACTATGGCAATGCCTTTGCCTTTCCAATGGCACTTTCTAAGGCTGGACTTTTGTGCCAAAGCCCATTGGAATATGCATTGGGTTTGATAAAAAAGGCAAAGGCCCAAATGGGTCTAGAATATGTGAAATCAGTGGCGGATCTTATGGTTCTCAAGGATCGGCCCAAATACAAAACAAAAGAAAATTACCTTATTGGGGATACTACCCATGTGGGGTTCTATGATGTGGATTTTGGGTGGGGGAGTCCTATCTATGGAGGGCCTGCAGGGGCTATACCTTTTGTTAGCTTCTATGGACGGTTTAGAAACAATGAAGGTGAGGATGGGGTTGTTGTGCCAATTTTGTTGCCACACCATGTCATGAAGAGGTTTCTCTTTGAGCTGGTGAAGATCACAAGTGAGGTCCCTGTAGGTTTGTCTTACAACAAAATAACAAATAGGTCCATGTTGTAA 1359 0.4503 MMSSRTSFSVVHGEPELVVPAGPTPRELKNLSDIDDQEGLRFQHQVIMFYQKSHVMEGKHPATVIKYGLAEALVHYYPLAGRLREWPNRKLTVDCSGEGILFVEAEAHVSLKELGNSILPPCPHMKELLLDVPGSQGILGCPLLLFQVTRLTCGGFAFAARMNHTICDSLGLVQFLTMVGEIARGVSISQFPVWQRELFSARDPPRITYAHHEYDQTKHCSNKDTMDFDQMAHESFFFGPKEIATLRSHLPQHLRKCSTFEILSACLWKCRTKALGLEPNEIVGLSPFITARGKVGLHVPNGYYGNAFAFPMALSKAGLLCQSPLEYALGLIKKAKAQMGLEYVKSVADLMVLKDRPKYKTKENYLIGDTTHVGFYDVDFGWGSPIYGGPAGAIPFVSFYGRFRNNEGEDGVVVPILLPHHVMKRFLFELVKITSEVPVGLSYNKITNRSML 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01562 452 Pfam Transferase family 14 426 - -
Gma01g01562 452 Gene3D - 213 428 IPR023213 -
Gma01g01562 452 PANTHER LOW QUALITY PROTEIN: METHANOL O-ANTHRANILOYLTRANSFERASE-LIKE 9 434 - -
Gma01g01562 452 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 434 - -
Gma01g01562 452 Gene3D - 10 212 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01562 Gma-Chr1 51128198 51131630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01562 17 430 Monolignol Biosynthesis Gene Families AT5G48930 29.792 9.34e-50 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01562 - K19861 gmx:100817429 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01562 01 51128198 51131630 Gma01g01562 01 51128198 51131630 ECH