Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01556 ATGGCGGGGCAATCGCGGAAGTGGATGATTCTGGTGGCCACCATATGGATTCAGGCATTCACCGGCACCAATTTCGACTTCTCCGAGTACTCATCTTCCTTGAAGTCCCACCTCAACATCTCTCAGCTGCAACTCAACTACCTCGCCACCGCCAGCGACATGGGCAAGGTCTTCGGCTGGTCCTCCGGCCTAGCTCTCATGTACTTACCTCTCTCCCTCGTCTTGTTCATCGCCTCCTCCATTGGATTCATCGCCTACGGCCTCCAGTGGCTTGCCATCAAAAATCTCATCACCTTGCCTTATTATCTGTTCTTTCTTCTGTGTCTGTTGAGTGGCTGTAGCATCTGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATTAGGAATTTCCCAGTTAACAGACCCCTTGCATTATCACTCACTGTGAGTTTCAATGGTGTGAGTGCAGCACTCTACACACTTGCTGCGAATTCAATAGACCCTTCATCTGATGCATTGTACCTGCTCTTGAATGCCCTTGTTCCCCTTCTCACTTCCCTTGCAGCACTAGTCCCAATTCTTCTCCAACCCCCTTTAGACTCTCTCAATAGATCTCCAGAAGCTTCTCGCAGGAACTCAGTGATATTTCTAGTACTCAACTTCCTAGCCATTTTCACTGGCATTTACCTCCTTCTCTTTGGCTCATCAACTTCTGATGAATCCACGTCGAGGCTCTACTTTGGTGGTGCCATTTTGTTCCTCATATCCCCACTATGCATCCCTGGCACTATATATGCTCGAGATTGGTTTCACCATGCCATCCATTCCAGCTTTCGGATGGAAGGCTCCGGCTTCATTCTTGTCCATGTCGATGATCTTGAGCTGCATAAGGAACTCCTCACGCGTCAAAACAGCACTCTCAGTCTCAGCAATGGGGACGGTCATGGCCTGCTGAGTGAGAATGGATCCAAGTATAGAAGTCAGAGTGCAAAATCTAGTGATGTGTGTTGTGGCAAGATGTTTGGCCAGGATCAGTTGGCAATGCTAGGTGAAGAGCACACTGCTGCAGTGGTTGTCCAGAGGTTGGATTTCTGGCTCTATTATGTTACATACTTCTGTGGAGGCACAATAGGACTTGTTTACAGCAATAATCTGGGACAGATAGCTCAATCTTTAGGCCTCAGTTCAAGTATATCTACCCTTGTCACACTCTACTCGGCATTTTCCTTCTTTGGCCGCTTGCTTTCAGCTGTACCAGACTATATTAGAAACAAGTTCTACTTTGCAAGGACCGGATGGCTAGCCATTGGACTTGTTCCAACCCCAGTTGCATTCATACTGCTTGCTGTATCAGATAGTGCCGCGGCACTTAAAACAGGCACTGCACTGATTGGTTTGAGTTCTGGCTTCATATTCGCGGCTGCTGTGGCAGTTACATCGGAGCTATTTGGACCCAACAGTGTGAGCGTCAATCACAACATTCTCATAACAAATATCCCCATTGGGTCGCTTCTGTTTGGTTTTCTGGCTGCGTTGATTTATGATGAGAATGCTTACAAAATCCCGGGAGAGTTAATGGCTGACACACTGGTGTGCATGGGAAGAAAGTGCTACTTCTGGACATTTGTCTGGTGGGGAGGAATGTCTGTCCTAGGACTATGTTCAAGTGTGTTGTTGTTCTTGAGAACCAAACACGCGTATGATCGTTTTGAGAGACACCGGATTTCAGCTCAATTGATTGTGTCTTAG 1728 0.4728 MAGQSRKWMILVATIWIQAFTGTNFDFSEYSSSLKSHLNISQLQLNYLATASDMGKVFGWSSGLALMYLPLSLVLFIASSIGFIAYGLQWLAIKNLITLPYYLFFLLCLLSGCSICWFNTVCFVLCIRNFPVNRPLALSLTVSFNGVSAALYTLAANSIDPSSDALYLLLNALVPLLTSLAALVPILLQPPLDSLNRSPEASRRNSVIFLVLNFLAIFTGIYLLLFGSSTSDESTSRLYFGGAILFLISPLCIPGTIYARDWFHHAIHSSFRMEGSGFILVHVDDLELHKELLTRQNSTLSLSNGDGHGLLSENGSKYRSQSAKSSDVCCGKMFGQDQLAMLGEEHTAAVVVQRLDFWLYYVTYFCGGTIGLVYSNNLGQIAQSLGLSSSISTLVTLYSAFSFFGRLLSAVPDYIRNKFYFARTGWLAIGLVPTPVAFILLAVSDSAAALKTGTALIGLSSGFIFAAAVAVTSELFGPNSVSVNHNILITNIPIGSLLFGFLAALIYDENAYKIPGELMADTLVCMGRKCYFWTFVWWGGMSVLGLCSSVLLFLRTKHAYDRFERHRISAQLIVS 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01556 575 Pfam Nodulin-like 7 254 IPR010658 -
Gma01g01556 575 Gene3D MFS general substrate transporter like domains 352 564 IPR036259 -
Gma01g01556 575 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 575 - -
Gma01g01556 575 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 575 - -
Gma01g01556 575 SUPERFAMILY MFS general substrate transporter 6 558 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01556 Gma-Chr1 51046481 51051681 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01556 1 569 Nodulin-like Gene Family AT1G31470 57.193 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01556 - - gmx:100814771 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01556 01 51046481 51051681 Gma01g01556 01 51046481 51051681 ECH
Gma01g01556 01 51046481 51051681 Gma09g02011 09 45693673 45698336 GST
Gma01g01556 01 51046481 51051681 Gma16g00980 16 23112089 23117128 PCT
Gma16g00980 16 23112089 23117128 Gma01g01556 01 51046481 51051681 PCT