Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01554 ATGAAGCAGCCATCAAAGCCATGGAGACCCTTCACGGCAAATTGCTGCTCCACAGAGGACCAAACCATCTTTAAGAACTTCAGCAGGTGCAAGCCATCACGTTCAGATTTGTCAAAGAACATTGCACCTTTGCCATCATTCAGGAGGCTCTCTTTCTCCGATCTCAGCCGTTCGTCGTCGACGCGAATCAACGAGGATCTTGCACAGTCTTTTGGCTCGGATTTGTTTGATTTTCAGCTGAGTGAGCTGCGTGCGATAACTCAGAATTTTTCTAGCAATTTCTTGCTGGGTGAAGGTGGCTTTGGAACAGTGCATAAGGGTTACATAGATGACAATTTGAGGCTGGGTTTGAAGGCACAGCCTGTTGCAGTTAAGCTTCTTGACATTGAAGGATTACAAGGACACCGTGAATGGCTTGCAGAAGTGATTTTTCTTGGGCAGCTAAGACACCCCAATTTGGTTAAGTTGATTGGATATTGTTGTGAAGATGAAGAACGACTACTTGTCTATGAATTCATGCCACGAGGAAGTTTGGAGAATCACCTCTTCAGAAGGCTAACATCACTGCCATGGGGAACAAGATTAAAAATCGCAACAGGTGCTGCCAAAGGCCTTTCCTTCTTGCATGGAGCTGAGAAACCAGTCATTTATAGAGACTTCAAGACTTCCAATGTTTTGCTTGATTCAGAGTTCACGGCAAAATTGTCAGATTTTGGACTTGCAAAAATGGGGCCAGAGGGATCAAACACACATGTTTCGACTAGAGTCATGGGCACTTATGGATATGCAGCCCCAGAATACATCTCAACAGGCAAGATTAATAAATCAGTGATTTGCACCTATTTCCTGGCCATATGGCACTTGACCACCAAAAGTGATGTCTATAGCTTCGGGGTAGTCCTGCTAGAACTGCTTACAGGAAGGAGAGCAACAGACAAGACAAGACCAAAAACTGAGCAAAACCTTGTGGATTGGTCTAAACCTTACTTGAGTAGCAGTAGGAGGTTGAGGTACATTATGGATCCAAGGCTTTCAGGCCAATATTCTGTGAAGGGTGCAAAGGAGATGGCACATTTGGCATTGCAATGCATAAGTTTGAATCCTAAAGACAGACCAAGAATGCCAACGATTGTTGAAACTCTTGAAGGCTTGCAACAGTACAAGGACATGGCTGTTACCAGTGGACACTGGCCAGTGTCACCAAAATCTACCAAAAATAGAGTCTCCAACAATAATAAGGTGAATGTGAAAGCTAGAGCCGGTGCAAACCACAAGCAACCTTCACCAGTTCCTAGCAGAAAAACTTGA 1308 0.4434 MKQPSKPWRPFTANCCSTEDQTIFKNFSRCKPSRSDLSKNIAPLPSFRRLSFSDLSRSSSTRINEDLAQSFGSDLFDFQLSELRAITQNFSSNFLLGEGGFGTVHKGYIDDNLRLGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSLPWGTRLKIATGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSEFTAKLSDFGLAKMGPEGSNTHVSTRVMGTYGYAAPEYISTGKINKSVICTYFLAIWHLTTKSDVYSFGVVLLELLTGRRATDKTRPKTEQNLVDWSKPYLSSSRRLRYIMDPRLSGQYSVKGAKEMAHLALQCISLNPKDRPRMPTIVETLEGLQQYKDMAVTSGHWPVSPKSTKNRVSNNNKVNVKARAGANHKQPSPVPSRKT 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01554 435 PANTHER OS01G0588500 PROTEIN-RELATED 31 418 - -
Gma01g01554 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Gma01g01554 435 SUPERFAMILY Protein kinase-like (PK-like) 70 384 IPR011009 -
Gma01g01554 435 Gene3D Transferase(Phosphotransferase) domain 1 173 397 - -
Gma01g01554 435 ProSiteProfiles Protein kinase domain profile. 90 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01554 435 Gene3D Phosphorylase Kinase; domain 1 52 172 - -
Gma01g01554 435 MobiDBLite consensus disorder prediction 397 417 - -
Gma01g01554 435 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL15-RELATED 31 418 - -
Gma01g01554 435 Pfam Protein tyrosine and serine/threonine kinase 96 381 IPR001245 GO:0004672|GO:0006468
Gma01g01554 435 ProSitePatterns Protein kinases ATP-binding region signature. 96 125 IPR017441 GO:0005524
Gma01g01554 435 CDD STKc_IRAK 96 384 - -
Gma01g01554 435 MobiDBLite consensus disorder prediction 394 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01554 Gma-Chr1 51039118 51043730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01554 78 422 Glycoside Hydrolase AT3G07070 47.429 5.17e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gma01g01554 PK_Tyr_Ser-Thr 1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01554 - - gmx:100814241 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01554 01 51039118 51043730 Gma01g01554 01 51039118 51043730 ECH
Gma01g01554 01 51039118 51043730 Gma09g02009 09 45687097 45690966 GST