Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01548 ATGTTCGGTGGCGGAGGGGAGGACGCGCTGGCGGCGCGGCTGGGCATGATGCCGCCGTCGCTGCTGAATCCAGCGTCGGTGATGTCCGGCGAGATGTCTCCGGCGGTGCCGGCGGCGAGGGAGGAGAGGGGGCCGGCGCAGCCGCAGTGGAGCCAGCAGGAGACGCGGGAGTTCATAGCGATACGCGCGGAGCTGGAGAGAGACTTCACTGCGTCGAAGCGGAACAAGACGCTCTGGGAAGTGGTGAGTGCGAAGATGAGGGAGAGAGGGTTCAGGAGAAGCCCCGAACAGTGTAAATGCAAGTGGAAGAATCTCGTTAATCGCTACAAGGGAAAAGAGACATCTGACCCAGAGCATGGCAAGCAATGTCCATTTTTTGAAGAATTGCATGCGGTCTTTACCCAAAGGGCACATAATATGCAACGATTACTTCTTGAATCTGAAACTCGTTCAGCTCAAACCAAGAAAGGGGTGAAAAGATCAAGTGGAGATCGGTCATCAGAGGAACTCTCAGAAGATGACAATGAGGTTGAATATGATAGTGAAGAGGAAAAACCTTCCAGAAGTAATACCCGCAAAAGGAAAGTTGACAAAGTTGGAGTGGAGAAGTCTTCAAGGGCAAACAATCCATCAAATTCTGCCAGTAATAGTACTAGTATTCAGGAAATGCTCAAGGAATTTTTCCAGCACCAGTTAAGTATGGAGATGCAGTGGAGGGAGATGATGGAAAGGCGTGCTCATGAAAGACAGTTGTTTGAACAGGAATGGCGGCAGTCAATGGAGAAGCTTGAGAGGGAGAGGTTAATGATTGAACAGGCATGGAGGGAGAGGGAAGAACAGAGGAGAATGAGAGAAGAGAGTAGGGCAGAGAGAAGGGATGCTTTGTTGACGACCCTTTTGAACAAACTCATTAATGAATCTAACTAA 927 0.5027 MFGGGGEDALAARLGMMPPSLLNPASVMSGEMSPAVPAAREERGPAQPQWSQQETREFIAIRAELERDFTASKRNKTLWEVVSAKMRERGFRRSPEQCKCKWKNLVNRYKGKETSDPEHGKQCPFFEELHAVFTQRAHNMQRLLLESETRSAQTKKGVKRSSGDRSSEELSEDDNEVEYDSEEEKPSRSNTRKRKVDKVGVEKSSRANNPSNSASNSTSIQEMLKEFFQHQLSMEMQWREMMERRAHERQLFEQEWRQSMEKLERERLMIEQAWREREEQRRMREESRAERRDALLTTLLNKLINESN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01548 308 MobiDBLite consensus disorder prediction 145 218 - -
Gma01g01548 308 PANTHER - 46 306 - -
Gma01g01548 308 MobiDBLite consensus disorder prediction 181 202 - -
Gma01g01548 308 MobiDBLite consensus disorder prediction 29 53 - -
Gma01g01548 308 CDD GT1 48 113 - -
Gma01g01548 308 MobiDBLite consensus disorder prediction 152 168 - -
Gma01g01548 308 MobiDBLite consensus disorder prediction 204 218 - -
Gma01g01548 308 PANTHER - 46 306 - -
Gma01g01548 308 Coils Coil 253 273 - -
Gma01g01548 308 ProSiteProfiles Myb-like domain profile. 50 106 IPR001005 -
Gma01g01548 308 SMART sant 46 108 IPR001005 -
Gma01g01548 308 Pfam Myb/SANT-like DNA-binding domain 48 131 IPR044822 -
Gma01g01548 308 Gene3D - 50 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01548 Gma-Chr1 50991109 50993492 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01548 35 303 Trihelix Transcription Factor Family AT2G38250 45.055 1.12e-48 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gma01g01548 Myb_DNA-bind_4 1.2e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01548 - - gmx:100812635 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01548 01 50991109 50993492 Gma01g01548 01 50991109 50993492 ECH