Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01531 ATGCTCATAGTCATGGCTGCTTCAAGCTCTCTTTTGAGGATGGAACAAATACCTGGCAAAGGAAGAGGTCTTGTTGCATCACAGCCTCTAAAAGCAGGTCAAATAGTCCTCACTGAATCCCCTCTCATTCTCTACTCAGCTTCTCCTCTCCTCACACCCTCTTCTTCACCTTACACTTACTGTGACCATTGTTTCAGAATCTTACCTCTCACTCACAATAGTACTACTGTCACGTGCCCTTCTTGCTCAAACCACAGTTTTTGTTCCCAGAAGTGCTTCTCCCTTGCACTCAAATCCTCACACTCCACTTGGGTATGCAAAGCACTCATGTCTCTTCAACAACACCCCAATTCAACACTTCTTCAACAACACCCCCAAGAACGCCAAGTCCAAGCCCGTTTAATTGTTGCTTCTCACAAGCTCTTCCTTCACAATCACACCCCTTCTGAGCTAGACACTTTTCTTTCTCTTCATGGCACCCCAGATGATGCTATTCTTGATGCTGCTAACTTTCTTCACTCGCTAATCTCACCACTTTTCCCACCTCAGGCTCAACTCTCTGTGGATCTCATTGCACAACTTCTTGCAAAGGACAGACTCAACTCCTTTGGCTTAATGGACCCTTATTCCCCTGATGGCCCTCAGAGATCTATTAAGGCTTATGCTATTTACCCCAAAGCCACGTTCTTCAACCATGACTGTGTTCCCAATGCATGCAGGTTTGACTATGTGGACAGTACTAATGATGATTATGAACACAACAGTACTGACATTGTTATTAGGTTGATTGAGGATGTTGATGAGGGGAAAGAGGTTTGCATCAGCTATTTCAGGATTGGTAGGGACTATTGTACAAGGAAAAGGATCTTGATGGAGGATTATGGGTTTACTTGTGGATGTGATAGGTGCAAGATTGAAGCTAATTGGGATGGTGAAGAAAACAACAGTGACCTTCCACACGTGCGGTTTCTTAGCAAGTATGTTTGTGAGAGGAAGAATTGTGCGGGAACTATGGCTCCTCTGCCTCCAAAAGATGATGTGCCATCTAATGTTCTGGAATGTAACTTCTGTGGTAATTTTAAGATTGATGCTGCTTAA 1098 0.4399 MLIVMAASSSLLRMEQIPGKGRGLVASQPLKAGQIVLTESPLILYSASPLLTPSSSPYTYCDHCFRILPLTHNSTTVTCPSCSNHSFCSQKCFSLALKSSHSTWVCKALMSLQQHPNSTLLQQHPQERQVQARLIVASHKLFLHNHTPSELDTFLSLHGTPDDAILDAANFLHSLISPLFPPQAQLSVDLIAQLLAKDRLNSFGLMDPYSPDGPQRSIKAYAIYPKATFFNHDCVPNACRFDYVDSTNDDYEHNSTDIVIRLIEDVDEGKEVCISYFRIGRDYCTRKRILMEDYGFTCGCDRCKIEANWDGEENNSDLPHVRFLSKYVCERKNCAGTMAPLPPKDDVPSNVLECNFCGNFKIDAA 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01531 365 SUPERFAMILY SET domain 10 298 IPR046341 -
Gma01g01531 365 ProSiteProfiles SET domain profile. 10 277 IPR001214 GO:0005515
Gma01g01531 365 Gene3D - 123 202 - -
Gma01g01531 365 SMART set_7 10 283 IPR001214 GO:0005515
Gma01g01531 365 Gene3D - 60 122 - -
Gma01g01531 365 Gene3D SET domain 23 304 IPR046341 -
Gma01g01531 365 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 1 365 - -
Gma01g01531 365 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 1 365 IPR044238 -
Gma01g01531 365 CDD SET_SMYD 200 303 - -
Gma01g01531 365 Pfam SET domain 21 276 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01531 Gma-Chr1 50817497 50818919 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gma01g01531 SET 7.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01531 - - gmx:100808530 752.281