Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01530 ATGAGCGTTCCTCCGCCGTATGCGGCGGCGATGTGGACGCCGTTCACGGCGGCACAGTGGCACGAGCTGGAGCACCAGGCCCTCATCTTCAAGTACCTCAAGGCGGGTCTCTCGGTTCCCCCTGACCTCCTTCTCCCCATTCGCAAGAGCCTCCAGTTGATGTCTCATCCATCTCTGGGGTTTTATGGGAAGAAGATAGACCCTGAACCGGGTCGGTGCAGGAGAACCGATGGGAAAAAGTGGAGGTGTTCGAGGGATGCGCACCCTGACTCCAAGTACTGCGACCGCCATATGATACGGCGGCGTTACCGTTCAAGAAAGCCTGTGGAATCATCTCAAACTCACtcttcttcttcttcttcttcttcttcttctGCTACTGCTGCTTCTTCAAATTCAAATCCTGTTGCTGGTGGTGGTGGTGGTTCTGTTGCTAATGTTTCTGGAACTGCAACTGCTGCAAAAACCCTTCACACCCTTCCCTTGCACACCAATGGTGCAAGGGAAGGTTTCACTTTCACCCTTGGGAACAACACCAACACCACCCTCCCACACCTTCACATGAACCCCCTCACTCTTTCAGCTGACAATACCAAGAAAACTTACAGGTTTGGACTGAACTCAGAAGCAGATGAGCACAACGTCTTACAGAAAGATCTGGGAAGTGTGAGGTATCAAGGTTATGACTTTACCTCAGATGCCATGTGGTCTCAAATGTCTCACATTCCATCAAATACTGTTTCGGAATCAAGAAGTGGTTCTACTATGCTGGGCAACTGCTTCCAACATCAAACAATGCGAGATGCTGAGCTGTTGAACCTGGAAACGGCAAGGACCAAAGATCTTGTCTTTAGTGGCCAGTTAAGTTCAGCTGGGGGTTTGAAACAGGAATATCAGTCTCCCCAGTCTCTCTTCAGTGACTGGGACTGGAAGAAGGATTTAAGTTCCTCTGCCCTTGAGTATAAGCCTAACAAGGATTTTAACTGCAACCCAGATGCCAATGTTTGA 1008 0.4861 MSVPPPYAAAMWTPFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRKSLQLMSHPSLGFYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESSQTHSSSSSSSSSSATAASSNSNPVAGGGGGSVANVSGTATAAKTLHTLPLHTNGAREGFTFTLGNNTNTTLPHLHMNPLTLSADNTKKTYRFGLNSEADEHNVLQKDLGSVRYQGYDFTSDAMWSQMSHIPSNTVSESRSGSTMLGNCFQHQTMRDAELLNLETARTKDLVFSGQLSSAGGLKQEYQSPQSLFSDWDWKKDLSSSALEYKPNKDFNCNPDANV 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01530 335 Pfam QLQ 14 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma01g01530 335 MobiDBLite consensus disorder prediction 110 143 - -
Gma01g01530 335 PANTHER GROWTH-REGULATING FACTOR 1 335 - -
Gma01g01530 335 Pfam WRC 68 110 IPR014977 -
Gma01g01530 335 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma01g01530 335 MobiDBLite consensus disorder prediction 67 97 - -
Gma01g01530 335 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Gma01g01530 335 MobiDBLite consensus disorder prediction 66 143 - -
Gma01g01530 335 PANTHER - 1 335 IPR031137 GO:0005634|GO:0006351|GO:0032502
Gma01g01530 335 ProSiteProfiles WRC domain profile. 67 111 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01530 Gma-Chr1 50810173 50813852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01530 14 113 GRF Transcription Factor Family AT3G13960 58.036 1.37e-39 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Gma01g01530 WRC 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01530 - - gmx:100809947 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gma01g01530 01 50810173 50813852 Gma09g01971 09 45375629 45379329 GST