Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01525 ATGGCGCTTTATCTTTTCTGTCTTCTTCTTGCTATCACCTTGATTTTCATGCAAACTCTGGCAGATACTTCATGCACTGATTTTGGTGCATGTGGGTTTGGTTCCTTTGGTGCTACAGTCAATGGTGGAGATGTATCAGCTGCATCTTCTCTTTATCGAAATGGTGTTGGTTGTGGTGCCTGTTACCAGgtgaggtgtaccaacagtgtatattgctcagaaactggtgtgactgcagttataaccgaccaagcttcaagtgataacactgatttcattcttggcaaacatgcctttagccgaatggctcaaaccactgatgcagctgcttctctattagcccttggcgtggcttttatctttctatctgtctccagtgttgcatgcagctacccagataaaaacataacaatcaagatagatgagagcagcaacaacccatattacttggcttttgtcatttggtatcaacaaggaaggagagacataactgctgtgcagctctgtgagactcaaaactttgtgtgcaagttactagatagaagccatggggcagtgtggactactacctctccaccgagtggaccctttgtctttaaggatgttgtttag 612 0.134 MALYLFCLLLAITLIFMQTLADTSCTDFGACGFGSFGATVNGGDVSAASSLYRNGVGCGACYQVRCTNSVYCSETGVTAVITDQASSDNTDFILGKHAFSRMAQTTDAAASLLALGVAFIFLSVSSVACSYPDKNITIKIDESSNNPYYLAFVIWYQQGRRDITAVQLCETQNFVCKLLDRSHGAVWTTTSPPSGPFVFKDVV 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01525 203 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 28 134 IPR007112 -
Gma01g01525 203 PANTHER EXPANSIN-B3 22 197 - -
Gma01g01525 203 Gene3D - 15 128 IPR036908 -
Gma01g01525 203 PANTHER EXPANSIN-LIKE B1 22 197 - -
Gma01g01525 203 SUPERFAMILY Barwin-like endoglucanases 21 105 IPR036908 -
Gma01g01525 203 Gene3D - 129 203 IPR036749 -
Gma01g01525 203 Pfam Lytic transglycolase 48 106 IPR009009 -
Gma01g01525 203 Pfam Expansin C-terminal domain 136 200 IPR007117 -
Gma01g01525 203 SUPERFAMILY PHL pollen allergen 134 200 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01525 Gma-Chr1 50751667 50753362 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01525 21 203 Expansin Gene Family AT4G17030 39.130 5.82e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01525 - - gmx:100794009 356.681