Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gma01g01507 ATGGGTTGCATTTACTCGCGAGTCTGCATAGGCGACAATTGCAGAGGCTCCAGCATCAACGGAGACCCCATCGCGCGAAACGACGTCGCCGAAGTCGTGAATTTCTCCCCTTCCTCTTCGGATGTTGAAGAAGGCGAAATCAGAGACCAATTGAACCAATTGAGCATCACCAGAGACTCTGAAGCTGGAATCCGAAGACTCGCTAGGGTTTCCGCGCAGTTTCTTCCACCGGACGGTTCCCGAATCGTGAATGTTCCTTCCGGAAACTTCGAATTGCGGTACTCGTTCTTGTCGCAACGAGGTTACTACCCCGATGCACTCGATAAAGCTAACCAAGACAGTTTCTGCATCCACACACCTTTTGGTACGAGCCCTAACGACCACTTCTTCGGCGTCTTCGACGGCCATGGCGAGTTCGGAGCTCAGTGTTCTCAGTTCGTGAAGCGGAAACTGTGCGAGAATTTGCTCAGGAACTCCAAATTCCGTGCTGATCCTGTTGAGGCTTGTCACGCGGCGTTTTTAGCGACGAATTCGCAGCTGCACAACGATGTTTTGGACGACAGCATGAGCGGGACGACGGCGATTACGGTGCTGGTGAGAGGGAGGACGATATACGTGGCGAATTCCGGCGATTCGAGGGCGGTGATCGCGGAGAGGAGAGGGAAGGAAGTTGTGGCCGTTGATTTGTCGATTGATCAGACGCCTTTTAGGAGTGATGAGCTGGAGAGGGTGAAGATGTGTGGGGCGAGGGTTCTTACTATGGATCAGATTGAGGGGTTGAAGAACCCTGATGTGCAGTGTTGGGGCACTGAGGAAGGTGATGATGGTGACCCTCCGAGGTTGTGGGTGCCGAATGGGATGTATCCGGGGACGGCGTTTACGCGGAGTATTGGTGATTCCATTGCTGAGACTATTGGGGTTGTGGCAAATCCTGAGATTGTTGTGTTTGAGCTCACACAGGATCACCCTTTCTTTGTGCTGGCCAGTGATGGGGTGTTTGAGTTTTTGTCTAGCCAGACTGTGGTTGAAATGGTTGTGAAATTTAAAGATCCTCGTGATGCTTGTGCTGCAATTGTGGCAGAATCTTATCGGCTCTGGCTGCAGTATGAAACTCGTACAGATGACATTACAGTCATCATTGTGCATGTAAATGGACTAACTGAATCTGCTGTTGGTCAGTCAGCAAGTTATGGTGATGTTTTGCGAAACCCTGTGCCTCAAGTTGTAGAGGTGACAGGTTCAGAATCCCCTTCCACCTTTGGTTGGAGCGCTAGAAACCATCGTGTAAGGCATGACTTGTCAAGGGCACGCCTTCGAGCACTTGAAAATTCCCTAGAAAATGGTCAATCCTGGGTTCCTCCATCTTCAGCCCATAGGAAGACATGGGAAGAAGAAGCACACATAGAGCAGGCGTTGCATGATCATTTTCTCTTCCGAAAACTTACTGATTCTCAGTGCCATGTTTTATTGGATTGCATGCAAAGAGTGGAGGTCCAACCTGGGGATATTATAGTCAAACAGGGTGGTGAAGGTGACTGTTTTTATGTTGTTGGTAGTGGAGAATTTGAGGTCTTGGCGACTCAGGAAGAAAAAGATGGGGAGGTACCTAGGGTTTTGCAGCGCTACACAGCTGAAAAACTTTCATGCTTTGGAGAACTTGCTCTAATGTATAATAAACCCCTCCAGGCTTCTGTACGTGCTGTAACAAAAGGAACTCTTTGGGCTTTAAAACGAGAAGATTTTCGAGGGATTTTAATGTCAGAATTCTCTAACTTGTCATCATTGAAGTTGCTTCGGTCTGTAGATCTCCTTTCAAGGTTGTCAATTTTACAACTCAGTCAGATTTCTGACTCCCTTTCTGAAGTTTCCTTCTCAAATGGGCAGACAATAATAGACAAAGTAAGCTTTTGCTTGGTTGCTTTTGTCCATTTATTTTCTGTTCCTTTCCTAATGATATTCAGTATGTCTTTGCAGAATGAAGTCCTTGCATTGTACATTATCCAGAAGGGACGAGTGAAAATCACTTTTGATTCTGATTTATTGACTGGTCCAAATGCCTACAGCCTCAAGCCTGAAATCCAAAATGAGGATGATGCACAGAGCGGAAAAGAACTGTCAATAGAGAAGCCCGAGGGAAGCTATTTTGGTGAATGGGCCCTTCTTGGTGAAAATATTGGTTCCTTGAGTGCTGTTGCTGTGGGTGATGTTGTATGTGCTTTACTAACAAAGGACAAATTTGAATCTGTTATTGGCTCCTTACAAAAGATTTCTCAGGAAGATCACAAGTCAAGGGATTATTCCAAGGAGTTGACTACAAATTATGATTTTTCATCCCTTGATAAAGTCCAGCTCTCAGATTTGGAGTGGAGAAAGACGCTATATTCCACTGACTGCTCTGAAATAGGGCTTGCAAATTTAAGAGATTCAGAAAGTTTGCTTACTTTGAAGAGATTTTCTAAGCCAAAGGTGAAAGGGCTAGGAAAGGAATCACAAGTCTTGAAAGAGAAAATTTTGATTAAGGGTATGGGCTCGTCAGCCTGTATACCACAGGTTTTATGCACTTGTGCTGACCGCATGTATGCTGGAATACTGCTAAACACTCGCCTTGCTTGCCCTTTGTCTTCCATACTTTCAAGTCCTTTTAGTGAATCAGCAGCGCAGTTTTGTGCTGCTTCTGTTGTTATTGCCTTGGAAGACTTGCACAAGAATGGTGTTCTCTACAGAGGTGTGTCACCTGATGTTTTGATGTTGGAACAAACTGGACATATACAGCTGGTGGACTTCAGATTTGGAAAACAGCTTTCTGGTGAGAGAACATTCACAATTTGTGGGATGGCAGATTCACTGGCTCCAGAGATTGTTTTGGGAAAAGGCCATGGTTTCCCTGCTGACTGGTGGGCGTTGGGAGTTTTAATATATTATATGTTACGTGGTGAGATGCCATTTGGATCATGGAGAGAAAATGAACTTGATACAGTTGCCAAAATTGCAAAAAGAAAGCTACATCTTCCCGAGACTTTTAGCCCTGAAGCTGTTGATCTCATCTCCAAGCTACTTGAAGTGGAAGAAAGCACTAGACTTGGTAGCCAAGGTCCTGATTCTGTCAAGAGTCACCCATGGTTTAATTGTATTGAATGGGAAGGGATTAGACACCACACCTTTCCCGTTCCGCAGGAAATTATTTCTCGTATAACACAGTACTTGGAAGTTCATTCTGAGGATTGTAGTACTGGTTATCTGGGTTCTCCATTGCAGGAGGTAAAAGAACTTAATGTGCCTGAATGGCTTGAGGACTGGTAG 3300 0.4545 MGCIYSRVCIGDNCRGSSINGDPIARNDVAEVVNFSPSSSDVEEGEIRDQLNQLSITRDSEAGIRRLARVSAQFLPPDGSRIVNVPSGNFELRYSFLSQRGYYPDALDKANQDSFCIHTPFGTSPNDHFFGVFDGHGEFGAQCSQFVKRKLCENLLRNSKFRADPVEACHAAFLATNSQLHNDVLDDSMSGTTAITVLVRGRTIYVANSGDSRAVIAERRGKEVVAVDLSIDQTPFRSDELERVKMCGARVLTMDQIEGLKNPDVQCWGTEEGDDGDPPRLWVPNGMYPGTAFTRSIGDSIAETIGVVANPEIVVFELTQDHPFFVLASDGVFEFLSSQTVVEMVVKFKDPRDACAAIVAESYRLWLQYETRTDDITVIIVHVNGLTESAVGQSASYGDVLRNPVPQVVEVTGSESPSTFGWSARNHRVRHDLSRARLRALENSLENGQSWVPPSSAHRKTWEEEAHIEQALHDHFLFRKLTDSQCHVLLDCMQRVEVQPGDIIVKQGGEGDCFYVVGSGEFEVLATQEEKDGEVPRVLQRYTAEKLSCFGELALMYNKPLQASVRAVTKGTLWALKREDFRGILMSEFSNLSSLKLLRSVDLLSRLSILQLSQISDSLSEVSFSNGQTIIDKVSFCLVAFVHLFSVPFLMIFSMSLQNEVLALYIIQKGRVKITFDSDLLTGPNAYSLKPEIQNEDDAQSGKELSIEKPEGSYFGEWALLGENIGSLSAVAVGDVVCALLTKDKFESVIGSLQKISQEDHKSRDYSKELTTNYDFSSLDKVQLSDLEWRKTLYSTDCSEIGLANLRDSESLLTLKRFSKPKVKGLGKESQVLKEKILIKGMGSSACIPQVLCTCADRMYAGILLNTRLACPLSSILSSPFSESAAQFCAASVVIALEDLHKNGVLYRGVSPDVLMLEQTGHIQLVDFRFGKQLSGERTFTICGMADSLAPEIVLGKGHGFPADWWALGVLIYYMLRGEMPFGSWRENELDTVAKIAKRKLHLPETFSPEAVDLISKLLEVEESTRLGSQGPDSVKSHPWFNCIEWEGIRHHTFPVPQEIISRITQYLEVHSEDCSTGYLGSPLQEVKELNVPEWLEDW 1099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gma01g01507 1099 SUPERFAMILY cAMP-binding domain-like 443 587 IPR018490 -
Gma01g01507 1099 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Gma01g01507 1099 Gene3D Transferase(Phosphotransferase) domain 1 872 1057 - -
Gma01g01507 1099 Gene3D - 88 384 IPR036457 -
Gma01g01507 1099 SUPERFAMILY cAMP-binding domain-like 663 757 IPR018490 -
Gma01g01507 1099 Gene3D Jelly Rolls 592 770 IPR014710 -
Gma01g01507 1099 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 36 1099 - -
Gma01g01507 1099 SMART PP2C_4 89 381 IPR001932 -
Gma01g01507 1099 Pfam Protein phosphatase 2C 123 362 IPR001932 -
Gma01g01507 1099 ProSiteProfiles cAMP/cGMP binding motif profile. 664 751 IPR000595 -
Gma01g01507 1099 CDD CAP_ED 603 751 IPR000595 -
Gma01g01507 1099 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 36 1099 - -
Gma01g01507 1099 ProSiteProfiles cAMP/cGMP binding motif profile. 477 586 IPR000595 -
Gma01g01507 1099 Pfam Protein kinase domain 806 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01507 1099 CDD CAP_ED 477 586 IPR000595 -
Gma01g01507 1099 Gene3D Phosphorylase Kinase; domain 1 785 871 - -
Gma01g01507 1099 SMART cnmp_10 603 765 IPR000595 -
Gma01g01507 1099 SMART cnmp_10 477 600 IPR000595 -
Gma01g01507 1099 SMART serkin_6 795 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01507 1099 CDD PP2Cc 109 383 IPR001932 -
Gma01g01507 1099 SUPERFAMILY Protein kinase-like (PK-like) 773 1070 IPR011009 -
Gma01g01507 1099 SUPERFAMILY PP2C-like 81 385 IPR036457 -
Gma01g01507 1099 Pfam Cyclic nucleotide-binding domain 496 587 IPR000595 -
Gma01g01507 1099 Gene3D Jelly Rolls 449 591 IPR014710 -
Gma01g01507 1099 PRINTS cAMP-dependent protein kinase signature 548 557 - -
Gma01g01507 1099 PRINTS cAMP-dependent protein kinase signature 498 512 - -
Gma01g01507 1099 PRINTS cAMP-dependent protein kinase signature 513 527 - -
Gma01g01507 1099 PRINTS cAMP-dependent protein kinase signature 746 758 - -
Gma01g01507 1099 ProSiteProfiles Protein kinase domain profile. 787 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gma01g01507 1099 ProSiteProfiles PPM-type phosphatase domain profile. 93 383 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gma01g01507 Gma-Chr1 50411039 50418664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gma01g01507 1 1099 PP2C-type Phosphatase Gene Family AT2G20050 66.490 0.0 1496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PKA-PKG Gma01g01507 Pkinase 3.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gma01g01507 - - gmx:100799821 2107.41